Nsal019843.1
Basic Information
- Insect
- Nebria salina
- Gene Symbol
- grh
- Assembly
- GCA_944039265.1
- Location
- CALUEJ010000292.1:52488-62506[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-63 1.2e-58 198.9 0.0 29 221 546 733 531 735 0.94
Sequence Information
- Coding Sequence
- ATGTTAGATATTGAGTCAAGAAAGCGCAAGAACAGTTTAGAGTCACAGGCCGTGGGCGGCGGCGGTGGCGAATCACAGGCGAGTGGAGACGGCGGCGGGGTGTCCCCGCTCCAGGGACACGGTGCTGCACGTATGGCAGATCTCTCGGGTGACCAGCATCAGCAGCAGCAGCATCACCACCATCAACAGCAGCACCAACAGCAGGGTGGCGGCGACCAAGAGCAGCATACGTGGCGAGCGTATTACGAACACCCTCTGACCGCCGCCACCACCGCCATGCTCAACATATCCGGTGGCGGTGCTGACGACCAAGCAGCTACCATGGGCTTCATCTACGAGTATTATAAACTGCCGCCCCTTGCGCCCGACTCTGTCACCGTCACGAAAGACAAGCTCGCCGACATGTGGACGAGCAACTCGCAGGCTAGCGGTATACTAACGTCACAACTAAAGGCAGCCAATGGTCTTCTGAACGGGGCGGGGCTAGAGATTGCGGCGCCGCCTCTTGGTACTGCTCTTGGCGGACAGTTAGGCGCTCAGCCTGACATCGGTCTGTTCATCAATCAGCACGTGGGGTACGCGCAACCCACCAGCGCCGGTGGCGTCGGTCAACATTTACAAATTGTCAAACGCGAACCAGAGGACCTTAGCCACCACCGGAAGCTTGATACTGGCTCGCCTGATTTAGATGCAGGCACTGTGTTTGGTGGCAAACAGCATCGTCCCAAGGTGGTGCTCGTTTCCTCAGCAAACGGTCATTCGAATGACTTAGTCGTCGATGTAAACAGCCCGCACGTGGTCATCAAGGACGAGCTGCATGTTCACCGTGGCCTAAACTCACCGCAACACGGTTCCCGTTCCATCAACGGTACACCGACATCGACGCACAGCAGCCTCTTGGCAGACGGTTCAAACACTGGACCCATTGAGCTTATAACGGCCGCCGACGGCGGTCTAAAACCGGCAATGTACACCGCGCAAATATTCTCGCATGGAAGCGCCAGCGGTTCACCATCCCCCATTCCATACTCGGATCACTCCACACAATATACGCAAAGTGCCCTAAGTGGTAGTGTTGCCGGCACTTATGTCACAGGTGGCGGCAATTCATCCGGTTCAGTGCGGACAGGCTCGGGTGGTGTTGCAGCTGCATTCACCGTTGCCGATCCTTACTATCGCGAATATTTCACGACAGTTACATCAAGTGGTGGCACACCTGAACCCGTGTACACCACACAACTTCGCCAAAATCAACTGGGTAGTTACAGCGACAGCGGTGAAGGTTCTAGCGCCGTGTCTACCGCTAGTTTTGTGGAACGATATGTACGCCAGTCAAGTTCTTATCACAGTAAAGGTGTGATTGCTGCTGCAGGTCTTACCGTCGATCTACCTAGTCCTGACAGCGGTATTGGAGCAGACGCGATTACGCCACGAGATCAAAATGCACTTCAACAGTCATTCGACTACACCGAACTTTGCCAAGCGAATCCAGGCTTATTGGATCCTGGGGCATTGGGAGCGCAACGTCCATCCACTGGTTCATCACCTGGAAGCGGACGTAATCGACCGTGGCACGATTTTGGCAGACAGAATGACGCagataaaattcaaataccaaAATTGTATTCACCCGTTGGATTTAAGTATCATTTAGAGACACCTATTTCGACATCGCAACGACGCGAAGACGATCGTAttacatatatcaataaaGGTCAATTTTATGGGATCACCCTTGAATATATTCCAGATCCAGACAAACCCCTCAAAAGTCAAACAGTTAAaAGTGTAGTGATGCTGATGTTTAGGGAAGAAAAGAGTCCTGAAGATGAAATAAAAGCCTGGCAATTCTGGCACGGTCGTCAGCACTCAGTCAAGCAACGCATTTTAGACGCTGATACCAAAAATAGTGTGGGTCTAGTTGGTTGTATAGAAGAAGTAGCTCACAATGCAATAGCAGTTTATTGGAACCCTCTTGACAGTTCAGCTAAAATAAACGTAGCTGTACAGTGTCTTAGCACGGACTTCAGTAGCCAAAAAGGAGTAAAAGGTCTACCATTACACCTACAAATCGATACATATGACGAGCCTCGCGATACAACCGTTTCGCATCGTGGCTACTGCCAGATAAAGGTTTTCTGTGATAAGGGAGCAGAACGTAAGACACGTGATGAAGAACGCAGAGCAGCTAAAAGAAAAATGACTGCAACCGGCCGCAAAAAACTGGACGAACTGTACCATCCGGTTTCAGAACGTTCTGAATATTATTCTATGAGCGATTTGGCTAAACCCCCTGTATTATTTACGCCAGCCGAAGATATAGATaaaTTAACATCGATGGAGCTTCAAGGTTTTTACAACCAAGAAACTGATAGTTCGCTCAGTGGAGGTGGTGGCCCTTCTGGAGACGGTAGCCAACATCTTAAATCCGGTTCGCCGTTTCTCCTTCATGCCGCTGTAAAACCTCCAACAACGCCAACGCTCAAATTCCACAACCACTTCCCGCCAGATTCCGACAAAAAAGAGGGCATATTAGAAACGAACGTCGTGACGACGGACGGAAACATTTTCACACCGCCGATAAAGAGGCCGAAGATGATGAGTCCGCCCGGCAGCGCTGGTCCACCACCGTTAAACGAACGAGTCATGCTTTATGTGCGCCAAGAAAGTGAAGAAGTCTACACGCCACTTCATGTGGTACCTCCAACAGCAGCGGGTCTTTTAAATGcgATTgagcataaatataaaatagactcATCGCGAGTCAATAACTTATTTCGCAAAAATCGCAAGGGaATTATGGCCAAAATTGATGACGAGATGGTTACGTATTACTGCAACGAGGATTTGTTTTTACTTGAGGTGAAGGCGATCGGTCTTGATGAGGAATATTACGACATAACATTCATCGAGCTGCCGGACCACTGA
- Protein Sequence
- MLDIESRKRKNSLESQAVGGGGGESQASGDGGGVSPLQGHGAARMADLSGDQHQQQQHHHHQQQHQQQGGGDQEQHTWRAYYEHPLTAATTAMLNISGGGADDQAATMGFIYEYYKLPPLAPDSVTVTKDKLADMWTSNSQASGILTSQLKAANGLLNGAGLEIAAPPLGTALGGQLGAQPDIGLFINQHVGYAQPTSAGGVGQHLQIVKREPEDLSHHRKLDTGSPDLDAGTVFGGKQHRPKVVLVSSANGHSNDLVVDVNSPHVVIKDELHVHRGLNSPQHGSRSINGTPTSTHSSLLADGSNTGPIELITAADGGLKPAMYTAQIFSHGSASGSPSPIPYSDHSTQYTQSALSGSVAGTYVTGGGNSSGSVRTGSGGVAAAFTVADPYYREYFTTVTSSGGTPEPVYTTQLRQNQLGSYSDSGEGSSAVSTASFVERYVRQSSSYHSKGVIAAAGLTVDLPSPDSGIGADAITPRDQNALQQSFDYTELCQANPGLLDPGALGAQRPSTGSSPGSGRNRPWHDFGRQNDADKIQIPKLYSPVGFKYHLETPISTSQRREDDRITYINKGQFYGITLEYIPDPDKPLKSQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLDSSAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYDEPRDTTVSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVSERSEYYSMSDLAKPPVLFTPAEDIDKLTSMELQGFYNQETDSSLSGGGGPSGDGSQHLKSGSPFLLHAAVKPPTTPTLKFHNHFPPDSDKKEGILETNVVTTDGNIFTPPIKRPKMMSPPGSAGPPPLNERVMLYVRQESEEVYTPLHVVPPTAAGLLNAIEHKYKIDSSRVNNLFRKNRKGIMAKIDDEMVTYYCNEDLFLLEVKAIGLDEEYYDITFIELPDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104034;
- 90% Identity
- iTF_01039889;
- 80% Identity
- -