Ning017170.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- gata5-a
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000220.1:244219-245391[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-17 8.8e-14 50.8 1.9 1 35 255 288 255 289 0.98
Sequence Information
- Coding Sequence
- ATGGCATTATCATCAATGATACCAACAACATCTAACTATGACATCAAATCAATATCACCAGATTCACCCGACGATTGTTACGGCGAACCTGCTGATTTATCGAAACGTTCCGAAGATACCGTAAAATTAACCTGCGTACCCGAAATACATCACATTAAAGACGAACTTGATGGTAACGTAGTCGAGGTTGAGACAAGCGTTATTTTCAAGAAAACAAAATCCCACCATGAAAAAGCTGAAGCAGTAACTTGTATACCAGAAATCCATCACATGCACATGAAAACCGAAGATGACGAAGAAGAAATCCGGCAACATATGCACATCGACGAGATGGAAGTAACCGTTGATGATTGTAAAAGTGATTGTAGCAGTGGGACTGATCCGGAAAGATTAGAAGTCGACGTAGACGCCGATGACATGTCACCCCAATCGAATTCAAACGCTGAGGATGCAGATTTATGGAAGGCGTTAGGACCTGGACAGAATGGACATAGTGATTTATTGCGTCAATTAATAACATGTCGGCGACGTTTAGCAGTTAGTATAGCTCCTGTCGGGGCGTCAAGTCCTCCCCCGCCTGAATCACCACCTGGTCACAGTAGCTCAAGTAATAAGGCTCGTCGAAAACAAAGTTTCCCTAGTCGAGCTCCGAACGAGACAGTCCCATCTCCTACAACAGATCCATGGGCGGGTTTACGTATAGCTAATAGCACGCCTCCAGCTCTACCAGCCTCTCAAACTCCTAGAAGAGTTCAACTCGCATGCAGCAATTGTGGCACAATGACTACAACAATATGGCGACGGAATATCCGCGGTGAGATGGTCTGTAATGCGTGTGGTCTTTACTTTAAACTTCACGGTGTCGATCGACCTCATACGATGCGCCGTGACACAATACACACCCGTAGACGCCGCCCTCGATGCCGGGGTGGCGGCGGCACTACTGGCACCGGGGAACATCAGAGATCTGAGACATTACCTAATGTGGTGGTGTCCAGTAAAACGGGTTGCGAAGATGATATGTTGAGTGCGCTTCGAAGGCATATACAACCCCAGTTGATGCTCGCTGCACTTCAAGCCTCACAGTGTCGAACCGATGATGATAATATATCTGATACGGAACCAGAGCTACCGCTTAATTTAGTAGCGGGACAAGATGGCGGCAGGCGGTAA
- Protein Sequence
- MALSSMIPTTSNYDIKSISPDSPDDCYGEPADLSKRSEDTVKLTCVPEIHHIKDELDGNVVEVETSVIFKKTKSHHEKAEAVTCIPEIHHMHMKTEDDEEEIRQHMHIDEMEVTVDDCKSDCSSGTDPERLEVDVDADDMSPQSNSNAEDADLWKALGPGQNGHSDLLRQLITCRRRLAVSIAPVGASSPPPPESPPGHSSSSNKARRKQSFPSRAPNETVPSPTTDPWAGLRIANSTPPALPASQTPRRVQLACSNCGTMTTTIWRRNIRGEMVCNACGLYFKLHGVDRPHTMRRDTIHTRRRRPRCRGGGGTTGTGEHQRSETLPNVVVSSKTGCEDDMLSALRRHIQPQLMLAALQASQCRTDDDNISDTEPELPLNLVAGQDGGRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873500;
- 90% Identity
- iTF_01041408;
- 80% Identity
- -