Ning007111.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- gata4
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000115.1:282629-287077[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-16 1.7e-12 46.7 3.4 1 34 352 384 352 386 0.97 2 2 4e-17 1.4e-13 50.1 7.9 1 35 408 441 408 442 0.97
Sequence Information
- Coding Sequence
- ATGGATTCTTCCGCACCACAAGACACTGAACACACCGAACAACCTCAACGCGACATCGAACAACCGGAACAACAATCACCAGAGCATCAAAAATCGGCAATAATGTCACCGCAAATCCAACAACCAAGTGTCATCACATCTCGACGACAAATCCGTACAATTACCACCGCCGGGCACATCACTGAAGAGACTATCGAAACTCAAATCCAACATTCCCCAAAAGAGGAACAACTATCGCCGGAATCGATTCCAGTACACGCAAATCCAAATGAGGCAACTACAGTTTTTAAGGAGGAACCTCAAAGGTATCCGGTTGCGATTGATGAACAATATGAGACGAGTACCGCAAACCAAGAAAGGTATCAAACGATTTATACTTCAGTTCCGAATGAGGATCAGCATAATTATAACCAAATTGAGGTGGAAGAGGGGTATACTATAACTGTTGTTGAAGGTGATGAAGCTTCGGTTGCGGCAAGCACGATTTATGTCCAGACTTCAGAAGGCAACATCCAGAGTTACGAAACTGTTGAACCAGTTGAAGAGAAACCAACCACATATATGGAACTCCAAGCACCGACACAACACCAATACACACCCGCGTATACAGAACCATCCCAGTTGCGTCAAAGCTTAATGCCTTGTATAAACCCATACACCATATCGCCAACGCGAGTGGAAGAATCCAGTCCACCAAATCCAAACACGGGCATGTTGTACCGGAACGACCCATCGTTAAGTTCAACGTATATGGGATCGGAACGAGCCACTCAATTATTGTACAGGGACCACCAGATTGGCGACCAACCAGTGTTCGAGGGGCAACTATTGAGTGGCCCATCAAACCAAGGGGCCACACTGTATGGCGTCAACAACAATACGTACCAATACATCAATCCGCAATCAGAATATTTCCCTGCCAATACAGTGTTGGTGAACGATGAACAACAAATTCATAACTATGCATACTCATCCAATATGCAGAATAACTCAAACTACAATTTGGGACAAGTACATTTGGAGCCTTGTATGCCAACAGGAGAGTTAAAAGAATGTGTTAATTGTGGCGCTAGTTTAACACCGTTGTGGCGAAGAGATGTAACCGGGCATTATTTGTGTAACGCGTGTGGTTTATACAGTAAAACAAATGGTATGAATCGACCACCGGCGCGAAACCAGAAGAAACCTACCACGAATGGTACACGGCGCACAGGAGTCCAATGTGCGAATTGCAAAACATCCAAGACTACACTGTGGCGAAGAAACTGTCAAGGAGAACCAGTTTGTAACGCGTGTGGACTTTACTTCAAACTTCACAGTACTCCTCGTCCTCCGAGTATGAAGAAAGAAGGGATTCAAACGCGTAAACGCAAACCGAAAAGCAACAACAACAATAACATGAATGGACTTCACAATATGGGCCCTGGCCCATCTGGACTTCAATCAAGGCAACAAACAATGCCTTTACCGCCAATGTACTCACCACACCATTTAAGCCATGGTATCTCTGAGCAATACCAGATGGCGCCAGTGGCGTCACAATCGCCAAATATACCATCATCAACTCTCCTAACACACCAAATTTCTAAGTAA
- Protein Sequence
- MDSSAPQDTEHTEQPQRDIEQPEQQSPEHQKSAIMSPQIQQPSVITSRRQIRTITTAGHITEETIETQIQHSPKEEQLSPESIPVHANPNEATTVFKEEPQRYPVAIDEQYETSTANQERYQTIYTSVPNEDQHNYNQIEVEEGYTITVVEGDEASVAASTIYVQTSEGNIQSYETVEPVEEKPTTYMELQAPTQHQYTPAYTEPSQLRQSLMPCINPYTISPTRVEESSPPNPNTGMLYRNDPSLSSTYMGSERATQLLYRDHQIGDQPVFEGQLLSGPSNQGATLYGVNNNTYQYINPQSEYFPANTVLVNDEQQIHNYAYSSNMQNNSNYNLGQVHLEPCMPTGELKECVNCGASLTPLWRRDVTGHYLCNACGLYSKTNGMNRPPARNQKKPTTNGTRRTGVQCANCKTSKTTLWRRNCQGEPVCNACGLYFKLHSTPRPPSMKKEGIQTRKRKPKSNNNNNMNGLHNMGPGPSGLQSRQQTMPLPPMYSPHHLSHGISEQYQMAPVASQSPNIPSSTLLTHQISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01041406;
- 90% Identity
- iTF_01039792; iTF_01041406;
- 80% Identity
- -