Basic Information

Insect: Nebria ingens
Gene Symbol: -
Assembly: GCA_018344505.1
Location: JADQWA010000112.1:140360-167872[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0011 0.09 13.3 0.1 1 23 166 188 166 188 0.97

2 8 3.3e-06 0.00026 21.2 1.8 1 23 194 216 194 216 0.97

3 8 0.074 6 7.5 1.4 1 23 235 258 235 258 0.95

4 8 1e-05 0.00082 19.7 4.0 1 23 269 291 269 291 0.97

5 8 1e-05 0.00085 19.6 0.2 2 23 298 319 297 319 0.97

6 8 1.4e-07 1.1e-05 25.5 3.2 1 23 324 346 324 346 0.98

7 8 9.9e-07 8e-05 22.9 0.1 1 23 352 374 352 374 0.99

8 8 0.34 28 5.4 0.1 1 14 380 393 380 397 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0011	0.09	13.3	0.1	1	23	166	188	166	188	0.97
2	8	3.3e-06	0.00026	21.2	1.8	1	23	194	216	194	216	0.97
3	8	0.074	6	7.5	1.4	1	23	235	258	235	258	0.95
4	8	1e-05	0.00082	19.7	4.0	1	23	269	291	269	291	0.97
5	8	1e-05	0.00085	19.6	0.2	2	23	298	319	297	319	0.97
6	8	1.4e-07	1.1e-05	25.5	3.2	1	23	324	346	324	346	0.98
7	8	9.9e-07	8e-05	22.9	0.1	1	23	352	374	352	374	0.99
8	8	0.34	28	5.4	0.1	1	14	380	393	380	397	0.86

Sequence Information

Coding Sequence: ATGAGGCCGGTTATTGAAGCTTGTGTGCCGAATATGATCATGTCTTGTACTTCTGTTATGATAGAAGAACACGATGGACTGCCACAAAAAATTTGTATTCAGTGTCTTCAGCAAATTAATCGTAGTTTTACATTTAAACAATTGTGTGAAAAATCCGATGCAGCATTGCGTCAATTTTTAATACAAAATCCGGAATTAAAGCCAACTCTAGAAGAATTTAAAGATGAACATAAAGGAACTTGCGTTATACAAAATATGACCGATTTTACGGATTCTATTACAATAAATTCATCCGTTGAGATCATTCACGTTGAAGACATTAATAATGGTGAAGCTCAGCTGACAACATTGCAAGTTTTAAATGACGCTACTTGGGAAATAAAACATTTAGAAGAAATAAATGATGTACGGCATGTTGACCCCGAAGGAGAAATAAATGAAGTTAGTCGAGAATCTAAAGAAGAAAAAGAGTTGCAGCAAACGGAAGAGGAAACATTTGAATGTTTAACATGCAATAAAATATTTGAAGCAAAATGGAAATTAGCAGCACATATGAAGGGCCATACAGGCCAAGGCACTCATGTATGTCCTGTTTGTGGAAAACGATGCAGTATTCCATCGTTGCTGAAGAAACATATGAAAATCCATGCGGCTGGGCGTACGCAACAGATTCAAGAACGAAGACGCATGAAAGATAAACCACACCGGTGTGAATTATGCAACAAAGGATTCCTCGGTGTCGAATCGCTACGAAAACATACGCGCGAACAACATTTCGGCGAGAAAAGGATCTACGAGAAGAAGCATATGTGCACGGCGTGTGGCAAAAAATTTTGCAACAGCAGTTGGTTGGAAATACATATGCGTAAACATACCGGCGAACGTCCGCTTACGTGTGAAACCTGCGGTAAAACATTCGCAATGCCTTCATCGCTGAGTAAACACGCGCTAACCCACTCGGAGCCGCGGCATCGATGCACCGAGTGCGGCAAAGCGTTCACCCAATCATTTCAGCTGACAGTGCACATGCGCAAACACAGCGGCGAACGGCCTTACGTGTGCGGTGTTTGCGGCAAGGGTACAACCACCAGCGAAGCGCTAACCGTGCATATGCGCACACACACCGGCGAACGGCCGTACCACTGTCACCAGTGTGACCACGCGTTTGCAAGAGACGAAAACATAATAGCACAAAAAAACCGTTTAATTCGTATTGTGATAGTACAACGTCCGTTTGTATACGATACTTTTACATATGCAGCTTGCCTTGATGCGCGACCAATACAAATACAGGATGCATTTGATCTATGTGAAGGCGTGGTAAGTTTAGCTCTTGATTATTCATGGAATAATGCGGAAATAAAAGATTTGAGTGTAGTTTCGAAATCCTCAAAATCTTGTGGACAGTTGAAAGACGACAATGTTTCACTATATCCATGGCACGCAGCCATTTGGTCAGAAAGAAATGGGTCACCAAAACGAATTTGTGCTGGTACAATTATCGCTCCAAAATATATTGTTACAGCAATTCCTGAACGTGGCTCCTTAACCGATTATGGAGCTGGTATATTTACTCAAAAAAATCATAAATATTATTTAAGGGGTATTTTAAATAGACCTGTTATACCAGATGATGAGGCATTATCTGTTTATTATCGTTTAATTACAAACATATTTCCGTATACTAACTTTATTAAAACTATTTTGAATACATATCAGCCAGAAGGTGACATTATTTTCGAGCCTAGTGTTTGTTCATCCGGTTACGATGTCCCGTGTAATAAAAGCACATGTATTATATATATATCTATTTGCAACCTCCAATGTGAATGTGACAATTGCGTCGATGAAGACAAACTAATGTGTAATTCAGAATCGACACCTAGGCTATTTGATGACTGCGGTGAATTTGATAAAGATACAAGTGATTATAAACCGTGGCGCTCAGGTATTTTCGTGCCATGGCATGCTGGAGTTTTAAGCGCAACTTTTGATAAATATGAAATTATTTGTGCAGCTTCAATCGTCTCTCCGAAGTATCTTATATCAGCTGCAAATTGTTTTTGGAATAGTGCATATAATACCCTAAGCGCTGAAGATTTTATTGTTGGTGCTGGATATGAAAACAATAATACATTTTTGCAATATCGAAGAATAACAAAAATTATTGCGAAAGATTATTTACCTGAATATTGGTGGAATGAAATTTCACGCGAAAGCCACTTAAATAACATTGCAATCATTCAATTGGATTCGTCATTAGATTTCGATGAAAACGTGAATGCAGTTTGTTTAACATCCATATTTCAAAAGCCACAATATTATCCTCATTTTGACCCATACAATCTTGTAAGCTGGGCGAAGGGAAATTTATATGGGCGAAATGCTGGTTTATACGAACGAACCATTTTTTTAAATAAACATTGCCGTGAAATGGTACCTAAAATTTCAGCACCAGAATATATGGATTCTAATAGAAAAAAATGTTTCTATGTACGGGATTGCGGTCCAGATAATGACAACGGTGCATGCATCGAAAAAACAAAACTGTGTAATCAAATTGATGATTGTCTTGATTTTTCCGATGAAATTCCATTCGCATGCAGTGAAAAATCAAGCCCTATTTATGAAGATTGTGGTTACAGTGATTTTGTAAAGGATAATGGAGAGTTTCCATGGACTATTTACTTCTATCACGATTATGATGATTATGATGATGATTACAAATACCTAAATAATGAATGGACAATTTTATGTACGGGTACACTTGTAACACCAAAAATAGTGATAACAGTTAAATCTGCTACATTCGTACCAAATGCTACATTTCAGTTAACGGATCATACTATAGGAATGGGTCTGTTTAATTTAGTTGATGATAGATATTATTTAAGATCTGTTAAACAACTTGACTGGAATTTCATATATATAAATGCCTTTATTGATAGCATCAAAGAAACTGATCCACCATCATTTTATTTAGCAAGCAATTATAGTTTATGGAATTGTGCGGAAAGGAAAGATTTGAATGTAATTTCGGAAACCTCAAAAATTTGTGGAAAGTTTAAAGACGACAATGCTTCTCTATATCCATGGCACGCAGCCATTTGGTCAGAAAGAAATGGGTCACCGAAACGAATTTGTGCTGGTACAATTATCGCTCCAAAATATATTGTTACAGCTGCATCATGTTTTTGGGATTTTAAGAATGAAAGGTTTCGCGATTTTCTTTCGGACATATATACAGTTTCATCTGGATTCAATGGGGAAAGTTTTGCTCAATTTAGTGAAGTATTCCACGTTCATACTGATGATTATCTATGGGAATTCAATGGTGAAAGTGATGTAAATAATGTAGCAATTGTTGAAATTGCGGCTAATTTTCAATTTGATAGTTTGGTTCAGCCAGCATGTATTGATTTTGAATATACTGAAAATATATCGGAGAAAAAAACTGCAATTATGATTTCTTGGTCAGTAAAAGGCGATTCAGAAAATTACGCGCCTGGTAAACTAACAGGAACATTTGTATCACATAAAGTTTGTGAAGAATATCTAAATAATAGATGTACTGAATGCGAAGCAGAAGGTCCCAATAATTATTCGAAATTATGCATGACAATTCCTGAACGTGGCTCCTTAACCGATTATGGAGCTGGTATATTTACTCAAAAAGATCATAGATATTATTTAAGAGGTATTATAAATAGACCTGTTATACCAGATGATGAGACATTATCTGTTTATTATCGTTTAATGACAAACGTATTACCGTATACTGCATTTATTAAAACTATTTTGAATACATATCAGCCAGATGGTGACATTATTTTCGAGCCTAGTGTTTGTTCATCCGGTTACGAAGTCCCGTGTAATAAAAGCACATGTATTAGATATACTTCTATTTGCAACTTCAAATGTGAATGTGACAATTGCGTCGATGAAGACGAACAAATGTGTAATTTAGAATCAACACCTAGGCTATTTGATGACTGCGGTGAATTTGATAAAGATACAAGTGATTATAAACCGTGGCGCTCAGGTATTTTTGTGCCATGGCATGCTGGGATTTTAAGCGCAACTTCAAATGCATATGAAATTATCTGTGCAGCCTCAATAGTCTCACCCAAGTATCTTATATCAGGTAAAGGAAACAAGATCAACACTTTCGCGGAAAGAATGGCTGCAAATTGTCTTTGGAATAGTGCATATAATACCCCAAGTACTGAAGATTTTTTAGTTGGTGCTGGATATGAAAATAGTACATTTTTACAATATCGAAGAATGACTGATATCATTACGAAAGAGTATTCACCTGAATATTGGTGGAATGCAATATCACGCGAAAGCCACTTTAATAACATTGCAATCATTCAATTGGATTCGTCATTAGATTTTGATGAAAACGTGAAAGCAGTTTGTTTAACACCCATATTTCAAAATCCGCAATATTATCCTGATTTCGATCCATACAATCTTGTAAGCTGGGCGAAGGGAAATTTATATGGACGAAATGATGACTTATCCGAACCAACCAATTTTCTTAATAACCATTGCCGTGAAAAGGTACCAAAAATTTCAGCACCAGAATATATGGATTCTAATAGAAAAAAATGTTTCTATGTACGGGATTGCGGTCCAGATAATGACAACGGTAATGGACTGTCCATTAAAATTAATGGTCGTTATTATTTATACGCTGTCTCAAATCCTAAGATACGAACTCAAAAGGGATTTAAATGCCAATATTATACTTTCACTACTTTGGGTTTATATTTTGATTTTATTATTAAATCTAATATTATAATTTAA
Protein Sequence: MRPVIEACVPNMIMSCTSVMIEEHDGLPQKICIQCLQQINRSFTFKQLCEKSDAALRQFLIQNPELKPTLEEFKDEHKGTCVIQNMTDFTDSITINSSVEIIHVEDINNGEAQLTTLQVLNDATWEIKHLEEINDVRHVDPEGEINEVSRESKEEKELQQTEEETFECLTCNKIFEAKWKLAAHMKGHTGQGTHVCPVCGKRCSIPSLLKKHMKIHAAGRTQQIQERRRMKDKPHRCELCNKGFLGVESLRKHTREQHFGEKRIYEKKHMCTACGKKFCNSSWLEIHMRKHTGERPLTCETCGKTFAMPSSLSKHALTHSEPRHRCTECGKAFTQSFQLTVHMRKHSGERPYVCGVCGKGTTTSEALTVHMRTHTGERPYHCHQCDHAFARDENIIAQKNRLIRIVIVQRPFVYDTFTYAACLDARPIQIQDAFDLCEGVVSLALDYSWNNAEIKDLSVVSKSSKSCGQLKDDNVSLYPWHAAIWSERNGSPKRICAGTIIAPKYIVTAIPERGSLTDYGAGIFTQKNHKYYLRGILNRPVIPDDEALSVYYRLITNIFPYTNFIKTILNTYQPEGDIIFEPSVCSSGYDVPCNKSTCIIYISICNLQCECDNCVDEDKLMCNSESTPRLFDDCGEFDKDTSDYKPWRSGIFVPWHAGVLSATFDKYEIICAASIVSPKYLISAANCFWNSAYNTLSAEDFIVGAGYENNNTFLQYRRITKIIAKDYLPEYWWNEISRESHLNNIAIIQLDSSLDFDENVNAVCLTSIFQKPQYYPHFDPYNLVSWAKGNLYGRNAGLYERTIFLNKHCREMVPKISAPEYMDSNRKKCFYVRDCGPDNDNGACIEKTKLCNQIDDCLDFSDEIPFACSEKSSPIYEDCGYSDFVKDNGEFPWTIYFYHDYDDYDDDYKYLNNEWTILCTGTLVTPKIVITVKSATFVPNATFQLTDHTIGMGLFNLVDDRYYLRSVKQLDWNFIYINAFIDSIKETDPPSFYLASNYSLWNCAERKDLNVISETSKICGKFKDDNASLYPWHAAIWSERNGSPKRICAGTIIAPKYIVTAASCFWDFKNERFRDFLSDIYTVSSGFNGESFAQFSEVFHVHTDDYLWEFNGESDVNNVAIVEIAANFQFDSLVQPACIDFEYTENISEKKTAIMISWSVKGDSENYAPGKLTGTFVSHKVCEEYLNNRCTECEAEGPNNYSKLCMTIPERGSLTDYGAGIFTQKDHRYYLRGIINRPVIPDDETLSVYYRLMTNVLPYTAFIKTILNTYQPDGDIIFEPSVCSSGYEVPCNKSTCIRYTSICNFKCECDNCVDEDEQMCNLESTPRLFDDCGEFDKDTSDYKPWRSGIFVPWHAGILSATSNAYEIICAASIVSPKYLISGKGNKINTFAERMAANCLWNSAYNTPSTEDFLVGAGYENSTFLQYRRMTDIITKEYSPEYWWNAISRESHFNNIAIIQLDSSLDFDENVKAVCLTPIFQNPQYYPDFDPYNLVSWAKGNLYGRNDDLSEPTNFLNNHCREKVPKISAPEYMDSNRKKCFYVRDCGPDNDNGNGLSIKINGRYYLYAVSNPKIRTQKGFKCQYYTFTTLGLYFDFIIKSNIII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -