Ning007508.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- ct
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000661.1:41833-54884[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-27 1.2e-23 82.8 0.0 3 72 433 503 431 508 0.95 2 3 1.7e-32 1.6e-28 98.5 0.0 3 77 820 895 818 897 0.96 3 3 5e-31 4.4e-27 93.9 0.0 3 75 1042 1115 1040 1119 0.95
Sequence Information
- Coding Sequence
- ATGCGGGGTGTGTCGCGGCGACATGCGGATGGTGTTCTTAACGGATATATGCAAAAACCTACCCCTTCACGGAGAGAGATTTCACAGCTAGTGGAAGAAGTCCAGAGGTTACAGAACAGCATCAGTAAACTCCAAGAATCTTCCATGACACAAATTTCCAGACTGGAAGAACAATTAGAACACAAAAGACAACATATAGCTAGATTAGAAGCAAGAATCGAAATACAAAAAGACTACGAAGATCTTAAAAGAGAAATCAGTGTCTTAAGATCCATTGACTTCTCATCTGGTAATCTAACCGATAGCAAATCCATCGAATTATTATTGCTTGAAAGAACAAAAGCCCTCCAACAAGCAGAGCCACCTATAATCAAACAAGAGCCCTCAGGAGGACCAACACAGACTCCTGTCTCTCAGCCTTCAAATCAGTGCCCCCCCATTCCTCAAATACCCCAACCGCCACCGATTCCACCACCATTGCCACCCACATCCGAATCTTCTTCGATGGAGAATAATTCCAATAACATTCTATTCCATCCTCCCTTGCAAAACGTCGAGCAGTTCGGCTCGTTTCTCGGCGAAGAGATCGTAGCCAACTGGCGGCGGTCACTCGAGCGAACGATCCTCGGCGGCGTGCCCCAAGTAATCACCTCATCACCACCTACAGATTCCCCAGTGAAGGCGACCACACCAGTAGTAGCCGACTCGACGGAGAAGAGTTCCGCTTCAACCCCAGTACCCGCCGACCCTGCTACCGGACCACAAGCTTCACCTACGACAGACTCCGACCTTCGATCCGAGCTACGACCTGATCACCGAACAGATCTCCGAAACGAACTTCGAACAGACCTACGAACCGATCTCCGAACAGATCTTCGATCCGAGCTTCGCTCTGAGCTTCGTTCCGATCTTCGGCAAGATCTTCGACAAGACCTTCGATCAGACCTGCGACAAGACCATCGACCAGACTTACGATCAGATCTGCGGCCTGACTTAAGACACATTAACGGCAACCCGAAATCACCTGAAGACAACAATAACCATCATGTTTCCAACAACAATATGACACCATTAAACGCAGCTGCTATGCTTTCGGTCAATAGTTTCCTTCGGAGTGACGACTTGAAATCGCCGTACCGATTTGACGACCATAGAAGTCCGTTCCGATTCGCAGACGAGCTCGGCATGCCTGGAGCGATGGTTGGACGTTTGGGGGAGTCCTTAATTCCAAAGGGGGATCCTATGGAAGCGCGGTTGCAAGAGATGTTGAGATATAATATGGATAAATATGCAACACAAAATTTGGACACGCTCCACATTGCTCGAAGAGTTCGGGAATTGTTGTCAATACACAATATTGGTCAGAGGTTATTTGCGAAGTATATATTGGGCTTGTCGCAAGGGACTGTATCTGAGTTATTGTCGAAACCTAAACCCTGGGATAAATTGACGGAAAAAGGAAGGGATTCGTATAGGAAGATGCATGGTTGGGCCTGTGATGAAAACGCGGTTATGCTCCTCAAGTCGCTTATTCCTAAAAAAGGTAAAGACACTGGAATTCCAACATTCGGTCGTCCCGAACCTGATATGACTGAAGAACGGATAGCGCATATCCTGAGTGAAGCTAGCCACATTATGAAAACACAAACGCCCGAAGATTCTCATAGCAATGACGATTCCAAGTCTCCCTCTCAAGGACAATGTCCCAGTCCCTTTTCCAAAGATTCCTCCCAAAACAGACGACTAAAGAAATACGAAAACGATGATATATCCCAAGAAAAAGTCGTACGAATATACCAGGAAGAACTGGCCAAACTAATGGGCCGAAGAGTTGAGGATATGCGAAACCCCAGGGATCATTTCTCAAGTCTTTTTTTCCCGCAATTTGTCAATAGTGGGATGCCGATGGACCGTACGCAGGACGATATTCGAATGGCCCTTGATGCATACCATCGTGAACTTGCCAAATTGCAACAATGCCAGAATCCCGGAAGTCTTCCAAACCTCCCAGTACTCCCAGGCTTATTGGCGCTGCAACAACAAGCCCTAGCCCAAAACCAACAACATGTTAATGGAGGTGTTCAAGACCTATCTTTGCCGAAAGAAAAAGGAAAAAGTATCAACGGAATGGATGATGCCAAAGAAAAAGAAAACGATGAAGCTATGCGACATGCAGGCAGCGCCTTCAGTCTCGTGAGACCAAAACTGGAACCCGGAAATAATCAACCACAAACAGGCTCAACAGCTTCCTCTCCCCTTGGTAATTCAATTCTTCCCCCAGCGATGACCCCTACTGAAGATTTCACATCTTCAGCAGCGGCTAGTCCCTTACAACGAATGGCTTCCATTACAAATTCTCTCATCTCTCAGCCTCCAACCCAATCCCACCACAGTCCTTCGCAACGACCTTTGAAAGCGGTGCTTCCACCCATCACCCAGCAACAGTTTGATCTCTACAACAACCTGAACACTGAAGACATCGTCAAGAAAGTCAAGGAACAGTTAAGTCAGTACTCCATAAGTCAACGACTGTTTGGAGAATCGGTCTTGGGCTTATCACAAGGCAGTGTTAGTGATTTACTAGCACGACCAAAACCTTGGCATATGCTTACGCAAAAAGGCAGAGAACCATTCATTCGAATGAAGATGTTCTTAGAAGATGATAACGCAGTCCACAAACTAGTAGCCAGTCAGTACAAAATAGCTCCAGAAAAATTAATGCGAACAGGGGGATATGGGACTAGTATAGCATGTACATCGATCGGAAAACCAATGCCTCCAACCCCAAAAATGTTGACTGAAGCTGCGGGGCTACTGAATAAAATGCAGCAAGAGGGACAGGGATCGTTATTACCCCCGTCTCTGCAGTTGGGTCCTCCGTGTCCGCCTGGAGGCCCACAGATCGTGCCTCAACCCCAACCACCACCGCCACCGATGTTGTTGACACCGCCTGGTATACCGCCTCATCACCCAATGAATATGCAAAATCCCGAGCATCTGAAGAAAGCTAACCAGAGTCCGCACGGGATCCCGCATTCACCCATGCAACAGCAACCGTCTTCCGCGTTACGAGCCCTTCACCAACACATCTCGCCGAGTGTTTACGAGATGGCAGCCCTCACCCAAGATCTCGACACCCAAACGATTACGACCAAGATTAAGGAGGCGCTCCTTGCAAACAATATCGGGCAAAAAATATTTGGGGAAGCAGTTCTCGGTTTGTCACAAGGTTCCGTCAGCGAGCTTCTATCAAAACCCAAACCTTGGCACATGCTCAGCATAAAAGGCCGCGAACCCTTCATCAGAATGCAGTTATGGTTGAATGATGCGCATAACATTGACCGTCTGCAAGCCTTGAAGAACGAACGCCGTGAAGCCAACAAACGAAGACGATCATCCGGGCCCGGGGCTCACGATAATAGTTCGGACACCTCATCGAACGACACCTCCGAGTTTTATCACTCAAATTCTCCAGGTCCCGGACCCCCATCCGCCAAAAAGCAACGAGTTCTTTTCTCGGAAGAACAAAAAGAAGCACTGAGATTAGCTTTCGCGTTAGACCCTTACCCCAACGTAAGTACGATAGAGTTTCTCGCTGGAGAATTAGCTCTTGCGAGTAGGACCATAACAAACTGGTTCCATAACCATCGAATGCGTTTAAAACAACAAGTTCCCCATGGTATGCCTTCTGATATTCCCCCACGAGATCAAAACAGTGGCCAAGCTCCGTTTGACCCTGTACAATTTAGACTGCTCCTAAACCAAAGATTATTAGATCTATCGAAAGAAAGAATGGGACTTGGTGGTGTACCCTTACCGTACCCTCCGTATTTCGCCGCGAACTCCAATCTGGCCGCGCTAATTTCTAGAGGGTTACTTCCGTCGGGTGATGTGGATCTCTCCGCTTTAGGCAACGCTGTCAAAGAACAAATTAGCGGGTTAGATCTTTCGATGACGTCATTGAAACGTGAACCTTCCGGGGATTATGACGATGAAGATGATGTCGAGAGCAACATGGGCTCAGAAGACTCGAATATGTCCGGAAGTCTTCACGGAGAGGTGAAGATCGAACAAAAAGAGACCCCTGTGTCGCATATGGGACAGGCGAGGTCTTCCCGGAGGAAACCTGCGGCGCCGCAATGGGTGAATCCCGAGTGGCAAGACGAGGGTAAAGAGAAACCCGTACCTACTGGTGACGAGATCATAATCAACGGGGTATGCGTAATGCAAACTGAAGATTATGGTAGAAGAAATTCAGAAGAGACTGTCAGAGTCGAACCGACCCCCGTAATGGATCGGTTCGATGACGACGGTAGTGATGATGGTTCCTCCGTGTCTCATGAAGATCGACCGCCCTCCAGCCCGCCCAATGTAAAAGAGGAGCAGGAAGAGGCGGAAGATAATCGGCAGAATGAGGAAAGTACGAATGAGATTTTGAATACGCCAGTCAAAACAGAAAACGAGGAGGAACGGTGGGACTATTAA
- Protein Sequence
- MRGVSRRHADGVLNGYMQKPTPSRREISQLVEEVQRLQNSISKLQESSMTQISRLEEQLEHKRQHIARLEARIEIQKDYEDLKREISVLRSIDFSSGNLTDSKSIELLLLERTKALQQAEPPIIKQEPSGGPTQTPVSQPSNQCPPIPQIPQPPPIPPPLPPTSESSSMENNSNNILFHPPLQNVEQFGSFLGEEIVANWRRSLERTILGGVPQVITSSPPTDSPVKATTPVVADSTEKSSASTPVPADPATGPQASPTTDSDLRSELRPDHRTDLRNELRTDLRTDLRTDLRSELRSELRSDLRQDLRQDLRSDLRQDHRPDLRSDLRPDLRHINGNPKSPEDNNNHHVSNNNMTPLNAAAMLSVNSFLRSDDLKSPYRFDDHRSPFRFADELGMPGAMVGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKGKDTGIPTFGRPEPDMTEERIAHILSEASHIMKTQTPEDSHSNDDSKSPSQGQCPSPFSKDSSQNRRLKKYENDDISQEKVVRIYQEELAKLMGRRVEDMRNPRDHFSSLFFPQFVNSGMPMDRTQDDIRMALDAYHRELAKLQQCQNPGSLPNLPVLPGLLALQQQALAQNQQHVNGGVQDLSLPKEKGKSINGMDDAKEKENDEAMRHAGSAFSLVRPKLEPGNNQPQTGSTASSPLGNSILPPAMTPTEDFTSSAAASPLQRMASITNSLISQPPTQSHHSPSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGTSIACTSIGKPMPPTPKMLTEAAGLLNKMQQEGQGSLLPPSLQLGPPCPPGGPQIVPQPQPPPPPMLLTPPGIPPHHPMNMQNPEHLKKANQSPHGIPHSPMQQQPSSALRALHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELALASRTITNWFHNHRMRLKQQVPHGMPSDIPPRDQNSGQAPFDPVQFRLLLNQRLLDLSKERMGLGGVPLPYPPYFAANSNLAALISRGLLPSGDVDLSALGNAVKEQISGLDLSMTSLKREPSGDYDDEDDVESNMGSEDSNMSGSLHGEVKIEQKETPVSHMGQARSSRRKPAAPQWVNPEWQDEGKEKPVPTGDEIIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFDDDGSDDGSSVSHEDRPPSSPPNVKEEQEEAEDNRQNEESTNEILNTPVKTENEEERWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00766292;
- 90% Identity
- iTF_00872846;
- 80% Identity
- iTF_01040012;