Nbre006891.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- Pias1
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000104.1:803835-815111[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-26 4.9e-22 78.4 6.3 1 50 362 411 362 411 0.98
Sequence Information
- Coding Sequence
- atgtcAGCCGAATCGGAAGAGTTAAAAAATATGGTTTTAAATTTTCGAGTGTCAGAACTTCAGATGCTATTAGGGTTTGCTGGGCGTAACAAATCTGGTCGAAAGAATGAACTACAACAAAGAGCACTAGAATTATTGCGTGTTCGTTCGCATCCCGTTCATTTGAAGATTCGAGAACTCTACAAAAGTATTCAACAAAGCGGTGCACTTAACAATACGGGAGTTGTCGGTCAAACTACAGTCGGTGCAACAGCAAAAGATCTACAGCAACCGCCCACCTTAACGCCAAACATGCCTCAGCAGCAACACACCACCACACAATCAACCATACCACGTGCTACAGTGCACCCTTACAACGCGTCCGCAGATAACCGCCAACTGCCCCCGCCGAGATCAGCAAACATGTATACTCAACCAAGTATTTATCAATATACAACGCCACCGTATGCAACTGCGAAACCAACCATATCAACCGCATACCCGGTGCATCCCGATGTTCGGTTTAAGCGTTTACCATTTTTTGATGTGCTCTCCGATCTAATCAAACCCTCATCACTCGTGCCACAAAATACACAACGGATGCAGGATCACACATTTTTCTTTCACTTAACGCCCATTCAAGCCACCGACATTTCCACACACCGCGATCTGCGGCCAGAATCTAAATTGGAATATTTGAAACAAGTACAGTTGCGGTTCTGTTTGCTCGAAACGTCCTGCGATCAAGAGGACTTTTTCCCTCCAAATGTCGTCGTTAAAGTCAACAACAAAATGTGTCCATTACCgAATCCAATTCCAACAAACAAACCAAATGCTGATCCAAAACGACCTCCGCGCCCCGTAAATATAACACCGCTAATCAAACTTAATCCGACGATCGCAAACACTATAACCGTGTCATGGGCAGCTGAATACGGCCGAGGTTACGTTATGAGTGTTATGTTAGTACAAAAGCTAAACTCAGCTGAGCTGCTACAGCGATTGAAACAACGCGGGGTCAAACACTCGGATTATACGCGTGGATTAATCAAAGAGAAATTAAGCGAAGACGCTGATTGTGAAATAGCAACAACATCGTTAAGGGTGTCGCTTATGTGTCCATTGGGCAAAATGCGAATGTCGACGCCGTGTCGAGCGACCACTTGTCAACATTTGCAGTGTTTCGATGCGTCGCTGTTTCTACAAATGAACGAGCGCAAACCTACATGGAATTGTCCTGTTTGCGACAAACCAGCCCTCTACGATCACCTAGTTATCGATGGCTACTTCCAAGATGTGCTTGCTAGTGCCACGTTGCCTAACGACACCAACGAAATTCAACTGCACAAAGACGGCTCTTGGAGCTCGcaattaattgttaaaaaagaAAGCGTCGTCAAATCTGAAACCTTGGACGAAAGTGTGCAAATTATTGATGATGACGTAATCGCAGTATCGCCGGATGAAAAGACAAGCGCTGTTGGCACAGGTGTGGTAGCAAAGAATCAATCAATTGTCGATCTAACGCAGAGTGATTCGGATGAGGAACAACCCGCCAAGCGTAAAGTGCCACCAAAACCAGATTCGACGAACACATTTAATGATGCGACAAGCGTGTCAAGCACAGCGAGTTGTGTTCAGCTGAGCACCACATCCGGTTCGAGCTCAGTTTCGAGTTCCGGTTATCGGTCTCCGTCGGTGATTACTTTAGACTCGCCCAGTCCACCGACGTCGCCAACATCTCATCGACAAGCGTGTAATCAAACTCCAGTAAGGTCTTCGTGTATGATGGCCACTACTCCTCCAGTTATTAACTACCAACAATCGATTCCTAATCTAACCGCTGCAAGCGccggtgtttttaataacattaGCACTGGTTTACCATTTTTGGAGATCGACGATTCGGACAGTACCGGAAATGGAAGCGAATGCGCAAATCTGGCCTATAGCTTGGATGATTTGCGCGAATCGGGTTTGCCTCTGCAACGGTCCATGAATAAACCAAAAACCCAAGCCAAGTTCGGGGTGGTTGTGATATCACGTCCGCAGCCACCTAACTTTACTCACCACCACCAGCATGCGGCTCATTCTTCTTTTTCAGCACAGCGTCAGGATGGTGGTGGGGTGGGTATTACGGTTCCCGGTGTCAGACCAACTCGACCGTAA
- Protein Sequence
- MSAESEELKNMVLNFRVSELQMLLGFAGRNKSGRKNELQQRALELLRVRSHPVHLKIRELYKSIQQSGALNNTGVVGQTTVGATAKDLQQPPTLTPNMPQQQHTTTQSTIPRATVHPYNASADNRQLPPPRSANMYTQPSIYQYTTPPYATAKPTISTAYPVHPDVRFKRLPFFDVLSDLIKPSSLVPQNTQRMQDHTFFFHLTPIQATDISTHRDLRPESKLEYLKQVQLRFCLLETSCDQEDFFPPNVVVKVNNKMCPLPNPIPTNKPNADPKRPPRPVNITPLIKLNPTIANTITVSWAAEYGRGYVMSVMLVQKLNSAELLQRLKQRGVKHSDYTRGLIKEKLSEDADCEIATTSLRVSLMCPLGKMRMSTPCRATTCQHLQCFDASLFLQMNERKPTWNCPVCDKPALYDHLVIDGYFQDVLASATLPNDTNEIQLHKDGSWSSQLIVKKESVVKSETLDESVQIIDDDVIAVSPDEKTSAVGTGVVAKNQSIVDLTQSDSDEEQPAKRKVPPKPDSTNTFNDATSVSSTASCVQLSTTSGSSSVSSSGYRSPSVITLDSPSPPTSPTSHRQACNQTPVRSSCMMATTPPVINYQQSIPNLTAASAGVFNNISTGLPFLEIDDSDSTGNGSECANLAYSLDDLRESGLPLQRSMNKPKTQAKFGVVVISRPQPPNFTHHHQHAAHSSFSAQRQDGGGVGITVPGVRPTRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01041413; iTF_01040527; iTF_00873504;
- 90% Identity
- iTF_00873504;
- 80% Identity
- -