Nbre010364.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- gata5-a
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000172.1:334888-336060[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-17 1.7e-13 50.8 1.9 1 35 256 289 256 290 0.98
Sequence Information
- Coding Sequence
- ATGATGGCACTATCATCAATGATACCAACAACATCTCCCTATGACATCAAATCGGGATCACCAGAATCACCCGACGACTGTTACGGCGAGCCTGCGGATTTATCAAAACGTTCCGAAGATGCCGTAAAAGTAACCTGTATACCCGAAATACATCACATTAAAGATGAACTTGACGGTAACGGTGCCGAGGTTGAGACAAGCGTTATTttcaagaaattaaaaacccaCCACGAAAAAGCTGAAGCAGTTACCTGCATACCAGAAATACATCACATGAACATGAAAACAGAAGATGACGAAGATGAAATTCGGCAACATATGCACATCGACGAGATGGAAGTAACCGTCGATGACTGTAAAAGTGATTGTAGCAGTGGTACCGATCCGGAAAGATTGGAGGTCGACGTAGACGCCGACGATATGTCACCGCAATCTAATTCAAACGCTGAGGATGCAGATTTATGGAAAGCATTAGGACCAGGACAGAATGGACATAGTGATTTATTGCGTCAATTGATAACTTGTCGACGACGTTTAGCAGTTAGTATAGCTCCTGTCGGGGCTTCAAGTCCTCCCCCGCCTGAATCACCACCCGGTCACAGTAGCTCAAGTACTAAAGCTCGTCGAAAACAAAGCTTCCCTAGTCGAGCTCCGAACGAAACAGTCCCATCTCCTACAACAGATCCATGGGCGGGTTTACGTATAGCCAACACCACGCCTGCAGCTCTACCAACCTCTCAAACTCCTAGACGAGTTCAACTCGCATGCAGCAATTGTGGCACAATGACTACAACAATATGGCGACGGAATATCCGCGGTGAGATGGTTTGTAATGCGTGTGGTCTATACTTCAAACTTCACGGTGTTGATCGACCGCATACGATGCGCCGTGACACAATACACACCCGTAGACGCCGCCCTCGATGCCGTGGAGGCGGTGGCACTACTGGCGCCGAACATCAGAGATCTGAGGCGTTACCTAATGTGGTGGTGTCCAGTAAAACGGGTTGCGAAGATGATATGTTGAGTGCGCTTCGAAGGCATATACAACCCCAGTTAATGCTCGCTGCGCTCCAAGCCTCACAGTGTCGAACCGATGATGATAATATATCGGATACGGAACCAGAGCTACCGCTTAATTTAGTAGCAGGACAAGATGGCGGTCGGCGGTAA
- Protein Sequence
- MMALSSMIPTTSPYDIKSGSPESPDDCYGEPADLSKRSEDAVKVTCIPEIHHIKDELDGNGAEVETSVIFKKLKTHHEKAEAVTCIPEIHHMNMKTEDDEDEIRQHMHIDEMEVTVDDCKSDCSSGTDPERLEVDVDADDMSPQSNSNAEDADLWKALGPGQNGHSDLLRQLITCRRRLAVSIAPVGASSPPPPESPPGHSSSSTKARRKQSFPSRAPNETVPSPTTDPWAGLRIANTTPAALPTSQTPRRVQLACSNCGTMTTTIWRRNIRGEMVCNACGLYFKLHGVDRPHTMRRDTIHTRRRRPRCRGGGGTTGAEHQRSEALPNVVVSSKTGCEDDMLSALRRHIQPQLMLAALQASQCRTDDDNISDTEPELPLNLVAGQDGGRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873500;
- 90% Identity
- iTF_01041408;
- 80% Identity
- -