Nbre011382.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- gata5-a
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000188.1:1285683-1300275[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 3e-14 53.2 3.2 1 34 360 392 360 394 0.97 2 2 2.4e-19 1.2e-15 57.7 5.9 1 35 414 447 414 448 0.98
Sequence Information
- Coding Sequence
- ATGTATGAAAAAATTGACTTATTACTACTGTGGGGCGTTAGCGTGTGCTTAGTCGGCGCGGATTTGTCGGTGGAAGCACAGCAATATGAGCAAGGGAGTGGCCCTTACAGTCCTGCCCAGGAGGCGGGCACCGATGCAGGGGCTGGGCCAGCTCCTACCACCGTCGACAGCCGACCAGCCACACCTTTGGAGTGTCTGCAGTATGCGACAAGTGTTCACGAGCACCACGACACCAACAACGATCACGATACGTACAGACAAGATATGCGGGCTGGCGAACATCGGGACTTTTTACTATTCAACGTGAATCGCATTGACGAGAATACACTACACGTAATCGAGGAACCCTCCAGTGCACAGTACTTGCAGTTGGACGGCGTCGCCGCGTCACCTGGAGACGGTTCGTCAGATTCTTCACCTGGACACGGTGCTGACGGTAGTTCACCAAGACGTGGGGGCTACACTCACTTGGCCACCCTCCAAACAGCTTCGGAAGAACGGGACAGCTACCATCAGGACATGGAGCATCATTCGGCGGCGCTGACATCTCTTGGAGCTCACGCGAATTATGCTAGTGCAGTCGAGGCGGCTACACATTCACCTCCTTCAGGAAATATGTCAAgTCCACTGTATTCTCGAAACTGTAGCAGCTTCTCGAGTGTTATGCCGTATTACAGCAACGGTTCTCCGGGTTCGGAACTCGTCACGCAGACATCTTCACAACTCTGGACCAATTCTGGTTTGAATACATCGAATGCATTGAATGAAGATTATCTAATGAAGACTGCAACAAGTACGTCGTCTTTACCAGCATTCAGCCGCTTACCAGCTGCGTTCGCAGCCCCGGCCCACCGAGGCAGTCCTTACAGCCCCAGCGCTGCAGCCAACGCTTACGGCTCCGACCCGTGGCCGTCCGCGTACGCGACGAGCGACCCAACCGCGTCTCTCCCATACAGCGTGATGTCAGCCCCGGTCGCCCGGAACAACAGAGGCCACCACAACGAACACACCATCCTGTCCGCGGCTGCTTCACTCAGTGCCATTGAAACGGCCGAGTACTTCAGTGAGGGACGCGAATGCGTAAACTGTGGCGCCATTTCGACGCCGTTATGGCGTCGCGACGGCACTGGTCACTACCTCTGCAACGCCTGTGGACTTTACCACAAGATGAACGGCATGAATCGACCACTGGTCAAACAACCACGCAGACTGTCTGCATCCCGTCGCATTGGGTTGATGTGCACAAATTGTAGAACGACAACTACGTCATTATGGCGACGTAATTCTCATGGAGAGCCTGTCTGTAATGCTTGTGGTCTATACTTCAAGTTGCATGGAGTCAATCGGCCCCAGGCCATGAAGAAGGATAGTATACAGACAAGAAAACGAAAACCGAAAGGGAGTAAAAATGAGTCCCCAAATACGTCATCTGGAAGTGTCTCGAGTACTCTAAACACTAGCAACATTAAGATTGAGCATCCAACGCCATTAGACAGTTACAACGATCTACGGGCAGTGACCTCAATGGGTGGTATCCATCACACGTCAACAGTAAGCAGCGCAGCTTATTCAATCTACACCCCAACAATATCAGCCTCAACTCACCAAACACAACAACACCAAAGAATCTCATCGCCCTACCAAGCGCACAGTCCCTCATTAACCTACCAGGAGCTCTTGCATTCCGGCTCCATGTCGCCGAAAGTAGAAGGCTTGTCGCCGGAAAGATCGCCCGTTGTGATGCACGGTGGTACTTCACCGTCAGGATACGAACTAGGCGCCCCACACATCGTCAACTTGGGtaacaataacaacaacaacaataaaatcatGGGTAATGGTGAGGCGGTTACGCACAGTAACATGGATAGGCCTACAGTTGTTTCAATGTCATCGTAA
- Protein Sequence
- MYEKIDLLLLWGVSVCLVGADLSVEAQQYEQGSGPYSPAQEAGTDAGAGPAPTTVDSRPATPLECLQYATSVHEHHDTNNDHDTYRQDMRAGEHRDFLLFNVNRIDENTLHVIEEPSSAQYLQLDGVAASPGDGSSDSSPGHGADGSSPRRGGYTHLATLQTASEERDSYHQDMEHHSAALTSLGAHANYASAVEAATHSPPSGNMSSPLYSRNCSSFSSVMPYYSNGSPGSELVTQTSSQLWTNSGLNTSNALNEDYLMKTATSTSSLPAFSRLPAAFAAPAHRGSPYSPSAAANAYGSDPWPSAYATSDPTASLPYSVMSAPVARNNRGHHNEHTILSAAASLSAIETAEYFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRIGLMCTNCRTTTTSLWRRNSHGEPVCNACGLYFKLHGVNRPQAMKKDSIQTRKRKPKGSKNESPNTSSGSVSSTLNTSNIKIEHPTPLDSYNDLRAVTSMGGIHHTSTVSSAAYSIYTPTISASTHQTQQHQRISSPYQAHSPSLTYQELLHSGSMSPKVEGLSPERSPVVMHGGTSPSGYELGAPHIVNLGNNNNNNNKIMGNGEAVTHSNMDRPTVVSMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040519; iTF_01041405; iTF_00873497;
- 90% Identity
- iTF_01040519; iTF_01041405;
- 80% Identity
- -