Nbre017845.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- -
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000432.1:143874-145328[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-06 0.012 16.6 0.5 2 45 78 135 77 136 0.85 2 2 9.8e-05 0.16 13.0 0.2 18 45 211 246 189 247 0.78
Sequence Information
- Coding Sequence
- ATGTCTCAAACAGTGAAATTGTACGATTGCGAAGGTGATCATTACTATGATTTAATGTTATCCGACGAAGACGCTTTCAAAGCAAGAGATGatCCTAATTATGCACAAACATTGTTAATGCATGCAAGAGcaacaacaaatataaaatcttCGCCAAGTGCAGAAGATCAAGAGGAGGCTGAGCCAATACTTGtgTCGATTACTTCAAATTTTAACCAAAGTTCAGAGAAGTGCTCGTGGAGTTTTGAAGAAGCggtttgtttaattaattcagTGGAAGTCCATTATGAAGATATGAACCATCCGCGGAAGCGGAAAGATGTGTGGGATATTATTTCCAAGGAAATGGAACAAGCTGGCTATATACGTACTCCGAAAAATTGTTCGGAAAAATGGAAAAACCTTTACCGAACGTACAAATCatgcaaatatataaagaCAAAATCCGGCCGTGGCCCGATACGTTTCATGTATTTCGACCAATGCGATGCATTTTTAAGCGACAAAATGGACATGCGATTAGCACCAGTTGACGCACAAACGTCCAATCCCACGCCAGAGATTTCGCCGTGGAGTTTCAACGAAAGTATAGCGTTAATAAACTCGGCTAAGTTACACTACCAAGCCATTCAGCATCCCAGAAAACGCAAAGAAGTTTGGGACATTATTAGCAGTGATTTAGAGAGATCTGGCTACAGTCGAACAGCAAAACAATGTTCAGATAAATGGAAAAACTTGTATCGAACGTATAAATCATGTAAAGATTCCAAATCGAATCCGCTCCGTGGACCAATGCGGTTTATGTATTATGATCAGTTGCACGAGATTTTAGAAGAAAAAGTTGAAATACCCGAAACGACATTGACTACAATTAGTATAATTGGTCTGCCGGAAGTGGAACCGGAACCGGATGCTGATGACCCTGATTTCATTGAAACTGAAGAATCGACGGAGGAGTTTTTGAAAGCGTCCAAAAAACGGAAAATTACTTTCAGTAATTATTTCGAACAAAGAACAATCGAATGGCAAATGAGACGAGCCGAAAAGAATGCGGAACGGGAGAAACGCGAACAACGACATCGCGAAAAAATGGCGCTGTTAAAACAGAAAATCGAAATCGAGAAACGAATTTTGGATGTGTTAAAAGCTAACCATTAA
- Protein Sequence
- MSQTVKLYDCEGDHYYDLMLSDEDAFKARDDPNYAQTLLMHARATTNIKSSPSAEDQEEAEPILVSITSNFNQSSEKCSWSFEEAVCLINSVEVHYEDMNHPRKRKDVWDIISKEMEQAGYIRTPKNCSEKWKNLYRTYKSCKYIKTKSGRGPIRFMYFDQCDAFLSDKMDMRLAPVDAQTSNPTPEISPWSFNESIALINSAKLHYQAIQHPRKRKEVWDIISSDLERSGYSRTAKQCSDKWKNLYRTYKSCKDSKSNPLRGPMRFMYYDQLHEILEEKVEIPETTLTTISIIGLPEVEPEPDADDPDFIETEESTEEFLKASKKRKITFSNYFEQRTIEWQMRRAEKNAEREKREQRHREKMALLKQKIEIEKRILDVLKANH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040056;
- 90% Identity
- iTF_01040809;
- 80% Identity
- -