Nbre009507.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- -
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000148.1:991909-993744[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.035 57 4.9 0.0 30 44 50 65 14 67 0.82 2 4 0.008 13 6.9 0.0 22 46 131 169 108 169 0.67 3 4 0.003 4.9 8.2 0.6 3 42 237 290 235 294 0.71 4 4 3.8e-05 0.062 14.3 0.4 2 45 393 447 392 448 0.89
Sequence Information
- Coding Sequence
- atggaacaaattgACACTGATTTATGGCAAGGGCCAGATACTGTGCAATTAATTGAGttgataaacaatttgaaaacaTCCAATGACAGTGAAATTTTCAATAACAACAATGAATTGTATATTGAAGTCGCGAATAAACTATTCGAATATGGCCACTCGCGCACATACAGCCAGTGCAAACGTAAATGGAAAGAACTCGTTGAGACGTATAACGAGTATAAAAAGACGGGGGATGGTGATCCGCCGGAATATTACGACGATTTGGATAAAGTGCTATCGAACACGTACGACGACCCATCAAACGACCCCGTCAACCAATACGGTCCTGTGTGGACTCAATATGAAACAAACTTCCTTATTAAAGTCATGAAAGTGGGTAATTTCCTCAATAAACTAAAAACCGACGACCCTCTAAATGTTTACGAACAAATCGCTGAATACATGCACAAAATCGGCCCAATCGTCCGAAATCGAGAAGATATCCAACAGCGTTGGTTGAATTTGAAACAatcgtatataaaatacattaaaggCGATTTGATGCATTTTAAGTACTTTGAATTAATGGACGCGTTGCTTGATTGGGAACCGAATTCAATTGCTTTCGAAGAAGATCAATTCAAAGACGGACACGAGTATGGCGATGAAGCATACCAAAATCCTGATGATTTCGAGTCGAAAGGCATCGCGTCAGCGAAACGCGCTCTAAACTGGACGCACAAAGAAACCGAAAGCTTATTGGAAGTGTTACAAAAACacaatattaaacaaatcaaACGCGAGAATATTGCAGCAGTGTTCGACGCTGCTTCTTTACACTTGAGACTGCAAGGTTTCAAACGCAGCTCAGAACAATGTCGCGTTAAGTTCAAACACTTAAAAGTCAAGTATTTCGATACTCTACGCAAGAAGCTCAGCGGGAATAAGAATGCGGAACGATTCTTCTATCATTACAACCGCATGAAAGATATTATGCATGTGGATGGTTGTTCGTCGGAAATGGATGCAGATTCCAGCGATTTTGGACAAGACAGCGAGCACTATGAAGTGGAATACTTGGAAGACAACCTCGACGAAGGCGAAGCCTTCGAGAAAGTCTTCCTCAACGAGCAACCCGACGCAAACAGCTATTCACCGTCATCGTATTCAAGTTCGCGGCGGCAGCGAAAAAGTCGCCAGATTTGGTCGCAAACCGAAACGCAACATctactaaatttattaaaagcgAAACAAGTTAAAAAGTACTCGCGACGCGTATTCTTCGAAGACATCGCTCATGAAATGGCGAAAGCTGGCTACAATCGAACCGCACACACATGCATGATCAAATGGAAGAATTTGCGTAATCAATTATACACGTCCGTGCGTAATATGGCGGAAGGCACCGAGGACCAATGCCCGTTTTACGATGAAATCCGTGTAATCGTCGTCAATAACGGACAAACCGACTCGCTCATGTTCGATGGGGAGCAACAAGAGTTCGATGAATCAGATCATTTCGATGCAGACGACACAATCGATCAGAAATTCAACGGCGGTTTGGAGCCAAATAAACTATATGGGGACGCCGATCGGCAATCGGATCCGATCAATAAACGGCGATTAACGGACGATGAGGAAGAGGAAACGGAACAGGACGTACAACAAACGAAGAAAGTGTGCGTGAATACTGTTGATGATTCgagtttgtttgtttgtaattATAAGATGGACGATACGGAACATTATTGTATGTCGCTAGCGCCGACAATTAAACGTTTAACGCGAGATAAACAAGCGAAGTTGAAgatacaaatacaaaaactaTTGTATGCGGCTGAGTTCGATGAAttgtaa
- Protein Sequence
- MEQIDTDLWQGPDTVQLIELINNLKTSNDSEIFNNNNELYIEVANKLFEYGHSRTYSQCKRKWKELVETYNEYKKTGDGDPPEYYDDLDKVLSNTYDDPSNDPVNQYGPVWTQYETNFLIKVMKVGNFLNKLKTDDPLNVYEQIAEYMHKIGPIVRNREDIQQRWLNLKQSYIKYIKGDLMHFKYFELMDALLDWEPNSIAFEEDQFKDGHEYGDEAYQNPDDFESKGIASAKRALNWTHKETESLLEVLQKHNIKQIKRENIAAVFDAASLHLRLQGFKRSSEQCRVKFKHLKVKYFDTLRKKLSGNKNAERFFYHYNRMKDIMHVDGCSSEMDADSSDFGQDSEHYEVEYLEDNLDEGEAFEKVFLNEQPDANSYSPSSYSSSRRQRKSRQIWSQTETQHLLNLLKAKQVKKYSRRVFFEDIAHEMAKAGYNRTAHTCMIKWKNLRNQLYTSVRNMAEGTEDQCPFYDEIRVIVVNNGQTDSLMFDGEQQEFDESDHFDADDTIDQKFNGGLEPNKLYGDADRQSDPINKRRLTDDEEEETEQDVQQTKKVCVNTVDDSSLFVCNYKMDDTEHYCMSLAPTIKRLTRDKQAKLKIQIQKLLYAAEFDEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040805; iTF_01040057;
- 90% Identity
- iTF_01040805; iTF_01040057;
- 80% Identity
- -