Nbre013189.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- crm
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000242.1:361188-364298[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-09 7.9e-06 26.8 0.0 1 44 98 153 98 155 0.94 2 2 6 9.8e+03 -2.3 0.0 22 30 154 162 153 165 0.87
Sequence Information
- Coding Sequence
- ATGGAGTCAGTGGACGTGACAAAGAATGTTGAGTCAATTGAACAGAAATTTGCGTCTAATGACGTTCATACACAACCGATTGAGGAAATGTTAGGCTCGGTTACtacttataataatttagatgGATCTGATATATTTAGCGGGTCGAAAAATTGTCAACAATTACGAACGAGTGCTCGagtgtttaaaaaaatgaaactAGATTCTGCGTTAGCAATAACAGCACCGAGCATCGATAAAGACAAGAAAGATGCTTTAAAcgatataaaaattgaaataaaaaaaccgTTACGACCGCAATGGTCGCCTGAGGACAAAAATATCTTCTTCGAAGCGCTGAATGAGTTCGGCAAAGACTTCGACGCTATACAACAATACATCAATAACAAATTCAAGAAAAAAGGTCTACCGGATTcgttaattaaaactaaagaTCAAGTGCGGCATTTTTTTTATCGCACTTGGCATAAAGTATCGAAACATCTTAAATTCGCTGAAGatattaaaaaaattgctcAAGAATTATATGCGTTGATCAATTATGGCGAGTTGCGCAAAAAAGTCGGTTCTGTATCTGAGAAAACTTGTATGAAATTAAACGAGCTGATTTATCGCGGCACTGTGGGGATCCGCATAAAAGGGAAGACAATTCGGATTAAAACACCAATGTGTCGAGCGTTACGTAAACTAAACCAATTGGATGAAAAACATGAGGATTTAAAGCTTCCAACTCGCGTTCTCGTTGAGCTACGCCCTAAAAACAATGAAACATGGTTAAGCGTACAATTCATGGCGCAAAATCCACGCGTGCAATGCTCCCTCCCGTTACAACGTCGCCTCAGCGCTCTTCTATCATGTATAAACTCACGCTGGAAAACGCAACTTACGCGAACACACGAAAAATGCCACACAATGACCGTCACGTCTGAGTGTGATCAAATAAATGGAGCTTGCATCGTTCCCCAATTACGAGTAACACCTAAATCAAACGTCCCCGTTGAAGTACCGACAATCAATTTAAGCGAATATTTAACAAGTCACCGTATTTGTTTGAACGCATATGAAGAACGGACTGGCGTTAAGATTCCTGGTGAGCAATTGTGGCAAACAATGTGCGCTAGTTTTAAGGGTGGAGGTAAAGGGGGGACGCGAAAAGGTGGCACGAAACGTCAAAGAAATGAAAGTATCGGTGAGAAATTAAAACCGAAAGAGAATTGTGATGAACACGATAGTGATAATCCAACAAGTGTTAGTGATGTGGTGGATACGGCAATCAATACGATATTATCGCTACAAAAAACGGACGCAACGGTGGACACATCGAACATCAAACACGAAATCAAACCCGATACGGAACCAGTTGCGTTGGCGTGTAAAGAAGAAAAAATAACGGAAATCAAAAACGGGTGGACAGTAGCGACATGCGGCACACTAACAATCGGTGAAATGTACCTAATGTTCGGGAACGATTCGAAACTCGAACTCGAATATTCGTGGGATTACGCGAACTTAAAATCCGAACCGTCCGAGCACGAAACGCCACTTGAAACCACTGCGACCACAAACGCATCAACAATCTCAAACACATCCACCACACTTAAAAAACTACTCTCTCTAGCGAAGCTCCACTATCGCAAAGAACGAGTACGATGTCCGTGCGGGCATGTATGCGGCGGGCACCCAAAAAACACAACAAACAACCGCAATAAATCACTAGCCGCAAAAACAACACGCAACAGCGACGACAAAACTGTATCTATTCGCAATTTGGATAATAACAATAAGGGCACCCAACTTCGAAACGCGCCCCAAAAATCCGAAACGTGCTTTAGGAAACCTAGTATATACCCTTCTAATGGCGCTGGGACTGATTCGTTTCGAGCTCAATTAGATTCGCTGCAACGAATGCGTCCGAAGTATACGAACCGTAAAGGTCGCCCAGTCCGCTCCAAACATGTGGTAGTGGAGCGTATGTTACCTTTATTACCAAAACCACTACTAAACGGTCATTCGTTGGTGACAATGAAAGTCATTTCACAAACAGATGATTTTAAATCGAAATTGCGACCAATCGCACCTAGATTAACGGAGGAGAATTTAGAATTAGAAGCGAGTAACTCTGAGTTTGAAACGTTATTTTTAACTTCGGAAACGTCTGAGGAAATGTCGGATGAGATTGAGATGCGAGAGATGACATCACCGACGAGTATTTCTAATTTCCTGGATTTAGATATACCGCAAAATACGAACGATCTGATTTTGACGGAAACTGTTGCGGCGAATAAAGACACTTTAACTAGTTTTGCAGgtTTACTTTCCGATGATCTCCCGGGCGGTACACCGTTATCTAGTCCGTCGCGCATTTTAAAAGAAACGGATCACCAATGGTTGAATTCAGAAGTAAACGATTATTCATTAACTAGTTTACTAGGTCAATTAGAATCGCCGATGAAAACGACGACGCCTGTTATCATAACAGAACCAATCTCACAAgatATTGATGCGCAATTCCCGTCGCTTTTGGGTGAAAATGGAGTTGATTTCGTCGACCAATTCGTCGATATGGCAGCTCAAGTGAACCCAGAACACACATAA
- Protein Sequence
- MESVDVTKNVESIEQKFASNDVHTQPIEEMLGSVTTYNNLDGSDIFSGSKNCQQLRTSARVFKKMKLDSALAITAPSIDKDKKDALNDIKIEIKKPLRPQWSPEDKNIFFEALNEFGKDFDAIQQYINNKFKKKGLPDSLIKTKDQVRHFFYRTWHKVSKHLKFAEDIKKIAQELYALINYGELRKKVGSVSEKTCMKLNELIYRGTVGIRIKGKTIRIKTPMCRALRKLNQLDEKHEDLKLPTRVLVELRPKNNETWLSVQFMAQNPRVQCSLPLQRRLSALLSCINSRWKTQLTRTHEKCHTMTVTSECDQINGACIVPQLRVTPKSNVPVEVPTINLSEYLTSHRICLNAYEERTGVKIPGEQLWQTMCASFKGGGKGGTRKGGTKRQRNESIGEKLKPKENCDEHDSDNPTSVSDVVDTAINTILSLQKTDATVDTSNIKHEIKPDTEPVALACKEEKITEIKNGWTVATCGTLTIGEMYLMFGNDSKLELEYSWDYANLKSEPSEHETPLETTATTNASTISNTSTTLKKLLSLAKLHYRKERVRCPCGHVCGGHPKNTTNNRNKSLAAKTTRNSDDKTVSIRNLDNNNKGTQLRNAPQKSETCFRKPSIYPSNGAGTDSFRAQLDSLQRMRPKYTNRKGRPVRSKHVVVERMLPLLPKPLLNGHSLVTMKVISQTDDFKSKLRPIAPRLTEENLELEASNSEFETLFLTSETSEEMSDEIEMREMTSPTSISNFLDLDIPQNTNDLILTETVAANKDTLTSFAGLLSDDLPGGTPLSSPSRILKETDHQWLNSEVNDYSLTSLLGQLESPMKTTTPVIITEPISQDIDAQFPSLLGENGVDFVDQFVDMAAQVNPEHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040059;
- 90% Identity
- iTF_01040808;
- 80% Identity
- -