Nbre003865.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- dnajc2
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000039.1:225338-227239[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00018 0.29 12.2 0.0 3 31 431 463 431 467 0.87 2 2 1.5e-13 2.4e-10 41.2 0.1 3 44 571 616 569 618 0.91
Sequence Information
- Coding Sequence
- atggGCGAAGCTAAAACGGTGAATTGCACTACAATCGCAGTACGCTATCGATTTGTGACACAAACGTCGAAAACTGGAGATGAAGAATGGAGATTCGAGCAAGAACCGCTGCGAGTGATAGAACTTCCACCTGAAGAGGAAGAAAACGATGAAGCTGTCGATGAGAGTAAATTCGTGGTAGATGTTACATTTTTACGAAGTTTGGATCCAAAAGAATGGAAAGATCAAGACCACTACGCGGTATTAGGATTAAAAAATTTACGGTACAAGGCGACAAATGATGATTTGAAGAAAGCATATAGGAAAATTGTTTTGAAACATCACCCTGATAAACGAAAGGCTTTAGGCGAAGAGATTCGCCCAGATGATGATTATTTTACGTGTATTACTAAAGCGTATGAGATCCTAGGCACACCAGTTAAAAGAAGAAGCTACGATTCAGTTGACCCGGAATTCGATGATGCTATACCGTCCGGCAGCGAATTGAAAAAAGATTTCTTCGAAGTATTCCCTaagtattttgaaataaatgccAGATGGtctgaaaagaaaaacgtaCCACTGCTCGGCGACGAAAACACAATACGAGAAAAAGTTGAAGAGTTTTACTCGTTTTGGTACAATTTTGACTCATGGCGCGAATTTTCTTATCTCGACGAAGAAGAAAAGGAAAAAGGACAAGATCGCGATGAACGACGATGGATAGAGAAACAAAACAAAGTCGCACGTGCTAAAAGAAAAAAGGAGGAAATGACACGAATCCGAACTCTCATTGATCTAGCTTACAACGCTGATCCACGCATCGCTAAATTCAAAACTGCGGAAAAAGAACGGAAATTGGCAGCAAAGCGAGCCAAACAAAACGCTGCACAAGCGCgcaaagaagaagaagaacgGTTGGTTAAAGAGCAACAGATTGCTAAAGATAAAGCAGATGCTGCTGAGAAAGCCCGGATAGAAGCCGCTCGCCAAGAGCGGGAAATTCAAAAGAAAGCGCTAAAAAAAGAACGAAAAATCCTACGCGATACTTGCAAatctaataattattattcggACAACGTTGAAGAGAATTTAACGCATATGACTGCAATGGAAAAGATTTGCGAGCAACTCAAATTGGTCGAGTTGGaaacattaaataaagatCTCAAAACGAATGGACGTGATGCTTTTGTGACTGCTATGAAGGAGTCTGAAGAGCGTATCGTGGAAGAGCGACGAGCATTACTTGAATCACAGCAAAAAACAGAGGCGGAGAAGCCGAAAACTGTGATAAAAGTTGCTGCGATCGAATGGACAACTGATCATAtccaattattaataaaagctgTGAATTTATTCCCTGCTGGCACAAATCAGCGATGGGATGTTATTGCGAATTTCTTAAATCAACATGGCTCTCTGCCAGAAGGTACTAGTTTCAATGCGAAAGACGTATTGAACAAAGCAAAAGATCTTCAAAATACTGATTTCTCCAAAAGCAACTTGAAAACCGCTGCGAACCAACAAGCGTATAACAATTTCGAGAAGGATAAACGTAACGTGAAAGTCGTAGATGATACAGAAATCTCGAAAAAAATCGATGGCGAAGTGACGAAAAAGGCTTCTAAAGCAGATAAAATCATGAATAACTCACATAATACTCCTAAACAAGTCGAGCCGATTGTTGTAAATGGTAAAAAGGCGGAACCTGTTGCAAAAACGGATTCAGCATGGACGCCAGCGGAACAACAGCTGTTAGAGCAAGCGTTGAAGACGTATTCCACGCCGACATCAGATCGTTGGGATAGAATTGCTGAGTGTATCCCAAATAGAACGAAGAAAGACTGTATGCGACGATATAAAGAATTAGTTGAAATTGTTAAAGCTAAGAAAGCTGCCCAGGCAGCGCTAAAAAAATAG
- Protein Sequence
- MGEAKTVNCTTIAVRYRFVTQTSKTGDEEWRFEQEPLRVIELPPEEEENDEAVDESKFVVDVTFLRSLDPKEWKDQDHYAVLGLKNLRYKATNDDLKKAYRKIVLKHHPDKRKALGEEIRPDDDYFTCITKAYEILGTPVKRRSYDSVDPEFDDAIPSGSELKKDFFEVFPKYFEINARWSEKKNVPLLGDENTIREKVEEFYSFWYNFDSWREFSYLDEEEKEKGQDRDERRWIEKQNKVARAKRKKEEMTRIRTLIDLAYNADPRIAKFKTAEKERKLAAKRAKQNAAQARKEEEERLVKEQQIAKDKADAAEKARIEAARQEREIQKKALKKERKILRDTCKSNNYYSDNVEENLTHMTAMEKICEQLKLVELETLNKDLKTNGRDAFVTAMKESEERIVEERRALLESQQKTEAEKPKTVIKVAAIEWTTDHIQLLIKAVNLFPAGTNQRWDVIANFLNQHGSLPEGTSFNAKDVLNKAKDLQNTDFSKSNLKTAANQQAYNNFEKDKRNVKVVDDTEISKKIDGEVTKKASKADKIMNNSHNTPKQVEPIVVNGKKAEPVAKTDSAWTPAEQQLLEQALKTYSTPTSDRWDRIAECIPNRTKKDCMRRYKELVEIVKAKKAAQAALKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040799;
- 90% Identity
- iTF_01040799;
- 80% Identity
- -