Nbre001290.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- DNAJC1
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000014.1:244225-245829[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 3.7e+03 -1.0 0.3 2 12 24 34 24 43 0.77 2 3 2.5e-07 0.00041 21.3 0.0 2 38 291 330 290 332 0.87 3 3 4.7e-10 7.7e-07 30.0 0.1 3 44 386 431 386 433 0.90
Sequence Information
- Coding Sequence
- atgtatagttCTTCGAAATGTTTCTATACATTAGTAATAAGTGTATTATTAGCAGTAATAGTGCCGATTGGTGCTTGGGAAACGGAGGAATTAGAAATATTCGACCTGGTTGAAGAAATCAATCAGAATTTCTATACGCTGCTTAATATATCTCAAGATGCAGATTTGcaatcaattaaaaaagcGTTCCGTGGTCTATCACTGTTACTGCACCCGGACAAAAATGACGCTCCAGATGCCGAGGTGCAGTTCCGAAACTTGGTGTCCGTGTACGATGTCCTCAAAGATCCAGGTAAACGCGAACATTACAACCAAGTCCTCAAAAACGGTCTGCCCAATTGGCGCTCAGCGGTGTACTACTATCGCCACGTCCGAAAAATGGGCCTCGCCGAAACCCTCACCACACTATTCATCGTGATCACCATCGGACAGTATTTAGTGGCGTGGGGCGCCTACATTGAAAAGAAGTACACAGCGGAACAAATGTACGGGGCCAAGTTAAAGAAGCAACAGAAGAAAAAGGGTCAAGTCTCTGCAGATATCATTGAGAAATTCGATATCCCTAAACCCTCATTCAAAAACACATTACCGATACAAATCCCATGGATGTTATGGTCAATTGTTACTGGACTTCCAGTCTTGGTTCGATTCATCAAAGAATTGATTGAAGAACGTCGAGAAAATAGGATTTTGCAACAGCAACAACTAGACGAATCGTCCGAGGAGGAACAATTCGAACGGGTGAGACCAGCGCGAAAGCGTAAACCAGGTTTTGTTTTAACCGAACGCGACGACTTGGAATTACCTTTACGATCAAATGATGTAAACGAGTCAGAATCCCGGCCCCGTCCTCCACCAATCATCACCGGTGGCCTATGGACCGATGACGACCTAGCTGAGCTTATTCATCTAGTGAAAAAATATCCAGGTGGCACTACAGAGCGCTGGGAGCGCATCGCAGAAGCAATGAATCGATCAGTCTCAGAAGTTACGTATATGGCAGCGAAAATGAAAGATAACTGCTATAGGGTGCCGCAAGAGGATTTTATGGCGCCGGAGAAGGAGGACGAGGAGGAGATCACACTCAAAAAACAGAAAACACGTGGGGGAAAGCTAGGAGCCGTTGCTACGGATGACCTAAAGAACCCGGATATCAGTTGGAGCCAAACGCAACAAAAAGCACTGGAAGGCGCGTTGGCGAAACACCCCAAAGGCCCTGGCGATCGTTGGGACAAAATTGCCAAATGTGTTCCAGAGAAAACTAAAGAAGAATGCATGTTgcggtataaatatttagtggATCTAGTTAAGAAGCAGAAAGAGAAGAAAGAACCTAATGAACAATTATAA
- Protein Sequence
- MYSSSKCFYTLVISVLLAVIVPIGAWETEELEIFDLVEEINQNFYTLLNISQDADLQSIKKAFRGLSLLLHPDKNDAPDAEVQFRNLVSVYDVLKDPGKREHYNQVLKNGLPNWRSAVYYYRHVRKMGLAETLTTLFIVITIGQYLVAWGAYIEKKYTAEQMYGAKLKKQQKKKGQVSADIIEKFDIPKPSFKNTLPIQIPWMLWSIVTGLPVLVRFIKELIEERRENRILQQQQLDESSEEEQFERVRPARKRKPGFVLTERDDLELPLRSNDVNESESRPRPPPIITGGLWTDDDLAELIHLVKKYPGGTTERWERIAEAMNRSVSEVTYMAAKMKDNCYRVPQEDFMAPEKEDEEEITLKKQKTRGGKLGAVATDDLKNPDISWSQTQQKALEGALAKHPKGPGDRWDKIAKCVPEKTKEECMLRYKYLVDLVKKQKEKKEPNEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040050;
- 90% Identity
- iTF_01040798;
- 80% Identity
- -