Nbre008230.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- rcor2
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000125.1:188466-196408[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 1.6e-06 29.0 0.0 3 46 131 174 129 174 0.97 2 2 2.6e-13 4.3e-10 40.5 0.0 3 46 377 420 376 420 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTAGCGGAAAAAGGTAACGAAAATGTACGGAACGGTCGACGAAGTCGGGGGCCGAGCCCTAACGGTCACGTAGGCACCGAATCCACGAGTGAAGACGAAAGTTCAGttcCTGTTGATAAAATACGAGTTGGTCGGGATTATCAGGCCGTATGCCCTGAATTGCAGCCGGTCGCAACACGCCGGCCTGATCAGCTAGCAGATAGGGCTCTTCTGGTCTGGTCTCCCACCGTAGACATATCCGAACAGAAATtGGATGAATACATCACATTAGCTAAGGAAAAATATGGTTACAACGGTGAACAAGCGTTAGGTATGTTATTTTGGCATAAACACGATTTAGAACGAGCCGTCCTAGACTTAGCAAATTTCACCCCATTTCCGGATGAGTGGTCCGTCGAAGATAAAGTCTTATTCGAGCAAGCGTTTCAATTTCACGGCAAAAGTTTTCATCGTATTCGACAAATGTTACCAGACAAAACTATCGCCAGTTTGgtgaaatattactactcgtgGAAGAAAACGCGGTCACGCACTAGTTTGATGGACAAACAGGCACGTAAGTTGACTGCACCACGGGAAGAGGGCGCAGCCTCCGAAGCTGGCTCCGAGGGCGGCTCCAACGAAGAATCAGACGTCGACGAGAAGAAATGGACAATTCACCGTGGTATTCGACGTAAGAGCGGTTCACCACCGCGTTCCGGTCAGCCAACTGATGAAAATCAAACGAATCAGGGGGAGGGGGGCGCGTGTGGTAACTGCGGCGTGTCCTGTTCGTTCACACATGTGTCGCCCAAAGGGGCTCTCTGCCATTCCTGCTTTCAACACTGGAGGCGCACGGGCGCATTAAGGCCAACGTCTGGCCCGTCGAAGCGTGGAGCCTCGTTGGGAGGCAGGCACAAACGGCGTCCACCTCGCGGCATGCACATCAATCACGATGATATTGCTGCCATGGCGACGGGCACACAAGGTATACATATGCTCCGAGCCATGGACCGGGAGGTTGTCTCTCTCAAACGACAAGTACAACAGAATAAACAATCTATCAGTGCACTAAAACGTAAAACCAGTGAGGGAATTGATGAAGTCAGACCCACCGGTGATTCAACATCGCGCATCAACGCGCGATGGACAAATGAAGAACTACTGCTTGCCGTACAAGGCGTCCGAAAATACGGCAAAGATTTCAAAACCATTGCCGAAACGTTGGGCACAAAAACAGAATCACATTTGCGTAGTTTTTTCGTCAACTATCGCAGACGATACAACTTAGACAGCGTGTTAAAAGATTATGAAAAAGATAATGGTCCAGTGACCATATCGCCCGACGATACGATGGAATCCGAGAAAATGGACGTCGATATGGATCCCCCGGAAATCACCGTTGGCGATTTGCCCAATTCAGTATCACCGACGCCTACAACAAGAGTTCCTCTGAAAACTGCTGGTAAGGTAGCGGTGTCTGCTGGTCAGGCTAATAAATGA
- Protein Sequence
- MVLAEKGNENVRNGRRSRGPSPNGHVGTESTSEDESSVPVDKIRVGRDYQAVCPELQPVATRRPDQLADRALLVWSPTVDISEQKLDEYITLAKEKYGYNGEQALGMLFWHKHDLERAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKTRSRTSLMDKQARKLTAPREEGAASEAGSEGGSNEESDVDEKKWTIHRGIRRKSGSPPRSGQPTDENQTNQGEGGACGNCGVSCSFTHVSPKGALCHSCFQHWRRTGALRPTSGPSKRGASLGGRHKRRPPRGMHINHDDIAAMATGTQGIHMLRAMDREVVSLKRQVQQNKQSISALKRKTSEGIDEVRPTGDSTSRINARWTNEELLLAVQGVRKYGKDFKTIAETLGTKTESHLRSFFVNYRRRYNLDSVLKDYEKDNGPVTISPDDTMESEKMDVDMDPPEITVGDLPNSVSPTPTTRVPLKTAGKVAVSAGQANK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104257;
- 90% Identity
- iTF_01104257;
- 80% Identity
- iTF_01040796;