Nbre014848.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- -
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000299.1:432483-435478[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.9 1.3e+04 -2.7 0.0 29 46 434 451 430 451 0.78 2 5 3.6e-08 5.9e-05 24.0 0.5 1 44 457 502 457 504 0.95 3 5 7.6e-09 1.3e-05 26.2 0.1 2 45 511 558 510 559 0.94 4 5 4e-06 0.0066 17.4 0.0 1 42 564 605 564 608 0.96 5 5 2.7e-05 0.044 14.8 0.4 3 42 614 651 613 655 0.80
Sequence Information
- Coding Sequence
- atggataCGATTGgcgatataaaaaaattagacGCGTTTCTAACGAAtctgAAAGCCGATCAATCCGAATCGGAATCGAACGATTCCGATTTAATACTCTGCGATAATAAACGCCGTGCCGTTGATTCCAGTTCGGATGAACGAGCACCGAATAATCTCTATGATGCGCTCGATACAGACACCGATGTGCAGACAACAATTGCGAATTGCACCGACGCAAAATTGCGTCAAGCATTGATATGCAACTTAAAAAAGCGACAAATGCTGAGTAAAATCTACAATAAACTCACAACGCATTTGAAGGCGTTAGAACAGTATCAAATCGCGAAACGCAACAAAGAGTATCGACATTTCCACGAGAATAAACGCGTGTTGAAATCCCGATTAGGTGCGCCGTTTTTCAAAGACACCCAATGCTACCCAAGCCCTAGAAACGCTGACTTAGTAGAGATGCTTCGCAACAAACGATTACCGCAAATctattatattaaaactatAACGTGGCGACGCACCGAAAAAAACGTGCTCGCACTCGGCGTTTATGAGGATATATGCGCGAAAAAGTTGATTGAAATCACGCGATTGATCAAAAACGATttgaaaacaaatagaaaatattccGAAGAGCTATTAGCGCTGGAGACGTTATTTAGCGACATGAATATCATCACTGAGTTAGCAGAGCACTGGAAGAGTGAAACGCTCGAGAATATTGATGAGGAGATTGTTAAACTTGCAACGAGTTTAGGTGTTGATCGCGATCATTTCGGAATTATACCAAACGCACATAAAACAACTGATTTAAATTCGGAAgcgaaacaatataaattcgAGTTTGTTGATGTTAAATCAGAACAAAGTCTAGACGAAATTAATTACGATCTTGAAGTCGCTAATAGTACTAAACCAAACGAACAAAATGCGTCGGATTGTGTACGAATTAAAATCGAGCATATTAATCGCGATAATCCCGAACCAAGCACTTCTAAGTCGCTAGACGACGATTCAACGCCGTTGAGTATCCGTAAAAGGAAATCTAAACAAGCAGTATTAATGAATACATCGAAAAAATCAGTTTTTATTGAATCGGACGCGCGTAAACGTCGCCTAGCGAAGATCGCCGAAAAAAACAAACGTTTCCACCAATTAATATTACGCAAACAAGCTGAACAAAGAATGGCGCGCACTTTAACACCAGATGAGCTGAAATTAATCGcgttaaataagaaatatattattttaagttgtaTTAGTAATTGGGATCAACATATAGATTGGTTGAAAATGTCGGTGACTTCAATGGCCGGCCGTCACGCGGATTTCGAGTGTTCGGCGTTTTGGAATGTTTACCTAAATCCGAAAATCAGCAAGAAACCGTGGACCGAACCGCAAAACGAGAAACTAAAACACTTCGCCGAAGTGCACAAATTCCAAAATTGGGATTTAATCGCAAACGAACTAAACATCAATAAAACTTCATATCAGTGTTGCGTTCACTTCCACACGAAGTTGTGCGATAAACACAACACGGAAAACTGGACGCAGGAAGAGGACGACGAGCTTAAAAACACCGTTGAGTTGTGTCGCGTAGGGAATACGATTTCGTGGAGTAAAGTCgcgttttatttcaaaacacGCGATCGCGTCCAATTGTACAATCGCTACAAATACGTTTTAGTACCCGTAAAAAAGGGTGCGTTCAGCGAAGCTGAAGACACCTTATTGCTAACATTACTAAAGATATTCGGTAAAAATATGACGAAAATCGTCACATATTTCGAGAACCGTCAAATCACACAATTACGCAACCGTTTAAGCTCAATGGAATGCCCCATACGCGAATGGTCGTTAGAGGATGACCGCGCAATCATTCAACACGTGCATAAACACGGTGAAATGCACTGGAAACTCTTAGATATTGGTCAAAACACAGCTAGAATCCGTCACCGTTTCCAATTCATAAAGAAATGGTCGGAAATGAACCCAAATGGCGACATTGAAACCATACAACGGCGCAATAAAACGCACCATAAAACCGCGTcgaaaaatagggcaaaaatCATCGATAAACTCGTCACTAAACTGTGCTTAGAAGCTCAAAACGCTAAAGAcgactataaaatattaaatattcctTACGTCGAAAAACAACTAGTATTAAATGCGCCTGCGTTAAAACAAAAGCGGAAACTACAAGAAACAAAGCCGAAACCAGTGAAACGAAAACCGGTTTTAGATGATTTATTCCTAGATTTTTTCAAATCGACCCATAAACATAGAGGGCGCGCTAAAACCCATCTAGACTATGTCGACGAGTCCGCGAAGCGGATCAAATCGATTTGCGCCTATTTAGACGTCAACCTAGAAATCCCAAACAGTGAAACCCTCACAAAACACCCACAAATAGACGATTTCGACATCGAAATCCTATCAAAACTAAAACACCTCCAAACGCCACAAACTCAAGCGACTTATTTCATACCCCCGTCCCCTGAGACCCTTATAGGTTTCCGAGGTTTGTGGCTGCACCACTCGACGCtatacgagcacgcgaaaggTCACATGAAAGGCTCGAACTATATAATCTCCGATAAATTTAACACGTTCCAAGGTTACCATTTCTGTAAAGCGCAATGCGAACAATATCTAGCGACTTTAGAGAAAACTAGTAAAGTGTTAGTGATGTCCGAGCGGCAAATGTTTTGGCGGCGTTTCTACGCGTTGTTCAAATGGCCTTGTTTGTTATCCGATTTCCAGAAAACTCCTAAAATTGTTGAATTACCTGTCGAGGCACCGGTGCAGGTAGTTAAGAAAGGGCGACCGAAAAAGAATTTAGACTCTGTTGTGCGAATGAATCAAGCGAAATTAGCGAAAAAACAATCGCGTGAACTCAAATCGCTTGGTCCGATTATTAGTGATGAGCCGGAAGATATTTCGTAA
- Protein Sequence
- MDTIGDIKKLDAFLTNLKADQSESESNDSDLILCDNKRRAVDSSSDERAPNNLYDALDTDTDVQTTIANCTDAKLRQALICNLKKRQMLSKIYNKLTTHLKALEQYQIAKRNKEYRHFHENKRVLKSRLGAPFFKDTQCYPSPRNADLVEMLRNKRLPQIYYIKTITWRRTEKNVLALGVYEDICAKKLIEITRLIKNDLKTNRKYSEELLALETLFSDMNIITELAEHWKSETLENIDEEIVKLATSLGVDRDHFGIIPNAHKTTDLNSEAKQYKFEFVDVKSEQSLDEINYDLEVANSTKPNEQNASDCVRIKIEHINRDNPEPSTSKSLDDDSTPLSIRKRKSKQAVLMNTSKKSVFIESDARKRRLAKIAEKNKRFHQLILRKQAEQRMARTLTPDELKLIALNKKYIILSCISNWDQHIDWLKMSVTSMAGRHADFECSAFWNVYLNPKISKKPWTEPQNEKLKHFAEVHKFQNWDLIANELNINKTSYQCCVHFHTKLCDKHNTENWTQEEDDELKNTVELCRVGNTISWSKVAFYFKTRDRVQLYNRYKYVLVPVKKGAFSEAEDTLLLTLLKIFGKNMTKIVTYFENRQITQLRNRLSSMECPIREWSLEDDRAIIQHVHKHGEMHWKLLDIGQNTARIRHRFQFIKKWSEMNPNGDIETIQRRNKTHHKTASKNRAKIIDKLVTKLCLEAQNAKDDYKILNIPYVEKQLVLNAPALKQKRKLQETKPKPVKRKPVLDDLFLDFFKSTHKHRGRAKTHLDYVDESAKRIKSICAYLDVNLEIPNSETLTKHPQIDDFDIEILSKLKHLQTPQTQATYFIPPSPETLIGFRGLWLHHSTLYEHAKGHMKGSNYIISDKFNTFQGYHFCKAQCEQYLATLEKTSKVLVMSERQMFWRRFYALFKWPCLLSDFQKTPKIVELPVEAPVQVVKKGRPKKNLDSVVRMNQAKLAKKQSRELKSLGPIISDEPEDIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040795;
- 90% Identity
- iTF_01040795;
- 80% Identity
- -