Nbre020869.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- kn_2
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000643.1:36542-44222[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-52 2e-48 166.0 0.1 43 136 5 98 2 109 0.96
Sequence Information
- Coding Sequence
- ATGTCATGTTTCAGTGTCGGCGTTGGTCGTGCGCACTTCGAGAAGCAACCCCCAAGCAACCTACGAAAATCCAACTTCTTCCACTTTGTCATAGCGCTCTATGACAGGGCCGGGCAGCCCATCGAAATCGAGAGAACCGCCTTCATTGGATTCATCGAAAAAGATCAGGAGACCGAAGGACAGAAAACTAATAACGGGATCCAGTATCGGCTACAACTTCTATACGCCAATGgTGTCAGACAAGAACAAGATATCTACGTCAGGCTCATCGATTCCGTCACAAAACAAAGGGTAAATTTGGCCCAAGTTGGCCACCGTGAGAGTATAATAGAACTTTCTAGATGGCCAGAGAAGGCGACGTCGAATGCCAGCGCTTTGCAACTTGTTTTTAAGAAAGAACTTAAGCAGCGCTCATTATTTCGAGCGGAGCACAAATGA
- Protein Sequence
- MSCFSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQETEGQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDSVTKQRVNLAQVGHRESIIELSRWPEKATSNASALQLVFKKELKQRSLFRAEHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -