Nbre017078.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- ARID5B
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000396.1:337397-338996[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-24 1.6e-20 74.2 0.0 2 89 126 211 125 211 0.94
Sequence Information
- Coding Sequence
- ATGAAGAGACTGGAAGGTGTCGAAGATAAATGGCTAAAAAATTCACTGGTAGCCGCACTCGGTGGTTTCACTGTTCCAAATAAAAATACCCGCGTCCTCTTTTGTCGAGACACATTTGACTATCCCGATTTAGAAGGACATGAACTATTGTGCAATCATCTAGCGCCTAAATTGAAAGGCCGACCTAGAGGGAAAAGAAAAAAGCGAAGCTTATCGCCGGGTGGGTCCGAAAGTAATGAATCTGAATCATCCGTATCAGCATTTGCATCGGCATCAATAAAGACAAGACTGACAACAGCTGGAGGCAGAAATGGTTTGCGCTGCAACAGCACAACTTCACCTCGCCGCAGTACAAGAAGTGCAGAAAATATTGAAGAACGTGATTTCTTAAATAACTTACATGCGTATATGAAATCACATCATACGCCTATTGGACGAATACCATCAATAGGATACAAAGAAAttgATTTGCACGCATTTTTCACAAAAGTACAAAAAGTTGGTGGCTATGAAAGTTGTACAGCAAATCGAATGTGGAAACCCATTTTTGATGAACTTGGAGGCAATCATAATAGTACTAGCGCAGCTACGATAACGCGAAGACACTACGAAAGATTACTATTATCTTTTGAAAGACATATCAAAGGAGAAGAATATAAACCTTTACCAATCTCCGAACGGCGCCGACTGAAGAGTAAAACATCAAGCTTTAGCGACGCTGAAAGTACTGAAGGAGATCGGTCAAGTAGTGGTAAGAGTACTCCAGTACCATCATCTTCAATTCTATTGCCAGTCACACCTACAACGCCTGTAACTCCCACTGAAGTCAAAGTAAGTACACTTGTCTCACATTTaacatcataa
- Protein Sequence
- MKRLEGVEDKWLKNSLVAALGGFTVPNKNTRVLFCRDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSLSPGGSESNESESSVSAFASASIKTRLTTAGGRNGLRCNSTTSPRRSTRSAENIEERDFLNNLHAYMKSHHTPIGRIPSIGYKEIDLHAFFTKVQKVGGYESCTANRMWKPIFDELGGNHNSTSAATITRRHYERLLLSFERHIKGEEYKPLPISERRRLKSKTSSFSDAESTEGDRSSSGKSTPVPSSSILLPVTPTTPVTPTEVKVSTLVSHLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -