Nbre023119.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- HLF
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000909.1:57763-58422[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-15 7.3e-12 46.0 10.1 4 62 159 217 156 219 0.95
Sequence Information
- Coding Sequence
- ATGAATCCAGTAACCAGCACAGTGTCTCCACCAATCAACATGAACGGCTTCGTAGAACCATTAGATTATTCAGCATCACCAATTTTAGATTTATGCGTGCGCCAAAAAAATCCGACACCAACAGAAAGTGACTTCTCCTCCGAGGAAGGATCAATCGTTTCCGAAACAATGTTCGACTTGAAATCGCATCCATCTACAATCAGAACAAtaaatacaacaacaacaacaacaacaatcaaAGCAACAACGCGTCCATTCAAAGCCTATCCAAAGGATCCTTTCGTGTTTTCAATCGGTACAAGTGCGCTAGACTCGAAAGAATCCGCCGAAGCGTACGCGGAGTTTCGGCAGAATATGCTGAATCAAGTGCGTGGAACCGGAAACGTTTCACCGACCGGCGTTTGTAACCCGAAAATGCGTCGCTTGTCGGTGACGTGTTCGCAAACCGGGCAAGAGCAAAACGGACGAGATGCTTCGTATTGGGAGAAGAGAAGGAAGAATAATGAAGCTGCGAAACGGTCTCGGGATGCTCGAAGAGCGAAAGAAGATGAAATTGCTATTCGTGCTGCTTTCTTAGAGCAAGAAAATCTCAAACTTAAATATCAATTAGCGACGTTAAAAAATGAAACTGCTAAACTAAGGTGTTTGctttataattga
- Protein Sequence
- MNPVTSTVSPPINMNGFVEPLDYSASPILDLCVRQKNPTPTESDFSSEEGSIVSETMFDLKSHPSTIRTINTTTTTTTIKATTRPFKAYPKDPFVFSIGTSALDSKESAEAYAEFRQNMLNQVRGTGNVSPTGVCNPKMRRLSVTCSQTGQEQNGRDASYWEKRRKNNEAAKRSRDARRAKEDEIAIRAAFLEQENLKLKYQLATLKNETAKLRCLLYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039877; iTF_01040604;
- 90% Identity
- iTF_01040604;
- 80% Identity
- -