Nbre014612.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- Xbp1
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000292.1:39382-41910[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-16 5.4e-13 49.7 12.0 2 63 48 109 48 111 0.95
Sequence Information
- Coding Sequence
- ATGAGCTCTAAAACCCCGATATTGATAACAGTGCCCCATTACGTGACGCTCGGGAGCCCTAATCCAGTGTTTAAGGATTATGTTGAGTGCAAACAAGATGTTGCGAAAGGGCGTAAACGGCGGCTGGATCACTTATCATGGGAGGAGAAATTGCAACGCAaGAAGCTGAAGAATCGAGTTGCGGCGCAAACATCGCGGGATCGCAAGAAGTTGAGGATGGATGATATGGAGGCGACGATACAAGATTTGCGGGATAGTAACGAGCAGTTGAAAGCCGAGTGTAAGGCGTTGAGGTTGTCGAATAAGAAATTGGTGGTTGAGAATGTTGCGTTGAAGAAATCGTCGCAGTGTAGCGGTTGTTCGAGGAAAAAGCGTAGAATCAGCAATTGCGCTGAAACGACAACAGACTATTTTGGCGATATTGAAACTACTGTTGACTTGTCTACTGAGCTCTTCGCCGACCTCGACGCCGAGCTCGATTTCGACAAACTGGAAGAGTTCGCTAATAGCCTACTCCAAGATATCACCGCAGACATGGAAGTGCCTCCTGAAGAAAGACAGATTACAACGGATAATCtcgaaaaaaataatacaagaaaAATGGTGGGGCCGCCACCAGTCGAGCTGGAACCCAGTCGAATTACCAGCATAACAAACCAACCCATACCGGACCAGCGAGCACCCACAATTCAAAAACGCCCCCAAAAATTAGCTCCAAAAACAAAACCACCCACAAAAAGCACCCCGACACCCCCAGAAACATACACGCCATTCACCGACGATGATTGCATAACGATAATCATCAGCGACGACATTCCAACTAGCGACGCAATCACAGAAATCGAAACGACAGAACCTGACGCCACAAATTTAGCGACTTACGTCGCAAATTACACCGTCGACGATGAGAATCCGCAATATTTGGAGTTGCAAGTTAATCGTTGCGAGGATTCGCAGTTTTTAAGCGTGAAAACTGAGAATAATACGAACAGCTCGGATTGCGGTTACGAATCGTTTAATTCACCGATTAGCGAGAATAGTGATGCGGAAATGTCCGAATTATGGAATCCGAGCGTTTCGTATCTGTTCCCGGATTTAGtatga
- Protein Sequence
- MSSKTPILITVPHYVTLGSPNPVFKDYVECKQDVAKGRKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKLRMDDMEATIQDLRDSNEQLKAECKALRLSNKKLVVENVALKKSSQCSGCSRKKRRISNCAETTTDYFGDIETTVDLSTELFADLDAELDFDKLEEFANSLLQDITADMEVPPEERQITTDNLEKNNTRKMVGPPPVELEPSRITSITNQPIPDQRAPTIQKRPQKLAPKTKPPTKSTPTPPETYTPFTDDDCITIIISDDIPTSDAITEIETTEPDATNLATYVANYTVDDENPQYLELQVNRCEDSQFLSVKTENNTNSSDCGYESFNSPISENSDAEMSELWNPSVSYLFPDLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040601;
- 90% Identity
- iTF_01040601;
- 80% Identity
- -