Nrib018389.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- SIZ1
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000608.1:155227-156250[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 5.5e-16 58.9 2.2 2 49 206 253 205 254 0.96 2 2 3.2 1.3e+04 -3.1 0.0 26 32 279 285 278 287 0.81
Sequence Information
- Coding Sequence
- ATGGCTGAAGAAGAACGCGATATAACAATTAATTGTTATATTATCAACTCAATACCTCGACCGATATGCAACGTAAAATTCCAACCTCTACCATTTTACAGAAATGTATATAAAGTGCTTCAACCAATGGCTATTTATTGTGTTCCAACAGTTAAGCCTAAACACACTCTATTTGATTTTGTGTTTGAATTGCCAGAACTAGTTAAAAGAGTAATAAACGAAAAGAAAAGTGCCCAATTGCAGATTCGATTTGGAAAAGAGCTGCCAGGGATGAGTGAGCTGTCGGAAGGATTACCAGGAGAAATACAGTTTTCTATCAATTCACACAAAGCCTCTGTAATGAATAGTCCTATTAATTATAATTGCACTACCGTTTTAAAATCTAATAATACTAAGAATGAAATCTTAATAACATGGCCTCATTGCAATGAACCATATTACATGGTGGTAAATATTGAAGAATCAATGACAGCTGAAGATATGGTGAAACAAGTACAATACAACAATAAAGTATGTTCTCGTACACTAAATACAAAAACTAAAATCAAAGAATTTTTGAAAAGTGTTGGACCACATACTGATATAGAACCATCCGATTTGCTGTCTCGTAAATTAAGTTTGTTGTGTCCAATAACCCAATTAAAAATGAAATTACCGACAAGATCCATGAAATGTAATCATTTAGAAAGTTTTGATTTGCATGCATTATTTTCAATGAATATGACAAGACCAACATGGAAATGCCCAGTTTGTAATATACCCATTTTGGTTGGTGAATTGGTAATAGATTCGTTCTTTTTGGATATTATTAATAGTTCATCTCTTCCTGAAAATTGCTTTGATATAATACTATACAAAAATGGCAACTGGGAACCATATATAGAACCAAAGATTGAATTCATTGAAGGTGATCAGAGTGAAGCTGACTAA
- Protein Sequence
- MAEEERDITINCYIINSIPRPICNVKFQPLPFYRNVYKVLQPMAIYCVPTVKPKHTLFDFVFELPELVKRVINEKKSAQLQIRFGKELPGMSELSEGLPGEIQFSINSHKASVMNSPINYNCTTVLKSNNTKNEILITWPHCNEPYYMVVNIEESMTAEDMVKQVQYNNKVCSRTLNTKTKIKEFLKSVGPHTDIEPSDLLSRKLSLLCPITQLKMKLPTRSMKCNHLESFDLHALFSMNMTRPTWKCPVCNIPILVGELVIDSFFLDIINSSSLPENCFDIILYKNGNWEPYIEPKIEFIEGDQSEAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -