Nrib024539.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- gata3
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000037.1:115974-127332[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-20 5.1e-16 58.8 4.7 1 35 308 341 308 342 0.98
Sequence Information
- Coding Sequence
- ATGTGTAGGCCGTCTCACTTTTCTCATCCGGCTGCCGCTTGGCTAAATGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAACAACCAGTTAGACACCAAAATGCAATCGTCGTCACCCGGCGGCGGTTGGTATTCGTCGTCGCCGACTGTGCAGGACGACTCACCATCGGCGGTCGCCTCTTCGTCCAAAGACATGCAACATTCCGGCGGCGGGGGAGGNNNNNNNNNNNNNNNNNNNNNNGGTGGCGGCGGCGTCGGCGGACATCCGATGTTCACGTTCCCGCCGACACCGCCCAAGGACAGCACGCCCGACTCGATGACCACCGCCACGACGACGGCCACGAGCNNNNNNNNNNNNNNNNNNNNNNNNAACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTCCATAGCGTCCATGGGCGTGTTCCTGCACCCGGACAACCATCAGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCCAGGACGTGAAGCCGTCCATGCTGGTGGCCGGTGGCTCGTCGTCCAAACAGCGCGAAGGTACCTCGTCGTCGAGCGGCGCCACGTCGCCCGGCAGCTCGACGTCCGCCTCGTCCTCGTTTAACGCGTACCACCTGAACCACCATCATCACCACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCACGAACCGGCCGCCTGCACCGCTGCGCCGACGTCCTCGTCGTCCTACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGCCATCGCTCCCGCCGTTTTCTCGCCCGCCAAACACCCCTCGTCCTCATGCCATTCGCCCGGCACCAACGCCATGAAAAACTCCTCGTCCTCGTCGTCCAGAAATAAGTCTAGGACCAGCGCCGAAGGACGAGAGTGCGTGAACTGCGGAGCCACGTCGACTCCATTGTGGAGGAGAGACGGCACCGGACACTACCTGTGTAATGCGTGTGGCCTCTACTATAAAATGAACGGGCAAAACCGGCCGCTGATTAAGCCCAAGAGACGTCTGTTTGTGACTAATTCGCTCCGAATTGTCCATCCAAAAGATGGATGA
- Protein Sequence
- MCRPSHFSHPAAAWLNGGXXXXXXXXXXXXXGNNQLDTKMQSSSPGGGWYSSSPTVQDDSPSAVASSSKDMQHSGGGGGXXXXXXXGGGGVGGHPMFTFPPTPPKDSTPDSMTTATTTATSXXXXXXXXNSXXXXXXXXXXXYSIASMGVFLHPDNHQGXXXXXXXXXXVQDVKPSMLVAGGSSSKQREGTSSSSGATSPGSSTSASSSFNAYHLNHHHHHLXXXXXXXXXXHHEPAACTAAPTSSSSYTXXXXXXXXXXXSAIAPAVFSPAKHPSSSCHSPGTNAMKNSSSSSSRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLFVTNSLRIVHPKDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -