Nrib002267.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- Gata5
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010001099.1:8302-10951[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-18 7.9e-15 55.0 2.1 1 34 8 40 8 42 0.97 2 2 1e-19 6.6e-16 58.5 3.2 1 36 118 152 118 152 0.98
Sequence Information
- Coding Sequence
- ATGTTTTGCGAGGGTCGCGAGTGCGTGAATTGCGGAGCGGTTTCCACACCATTGTGGAGGCGTGACGGCACCGGTCATTACTTGTGCAACGCGTGTGGACTTTACTTCAAGATGAACGGCATGAACAGGCCTTTAGTAAAACAACCCAAACGGCTGCTTGTAATTACTGGATCGTGTACCTACAGCTCTCCAGTGGCTTCCGGCCCGAGCTCGTCCGGTTCTGGAGATTTCTATAAGGGTCCTCTGTATCATCATGTGCCTGCCAGTTTTGCAAGGTCATCCGGAGCCGGCGGATTAGAAGAGAAAACCACGAGAAGAATGCAAAATGCATCTAGGCGTCAAGGGTTACAGTGCACAAATTGTCAAACGGCCACCACGTCGTTGTGGCGCAGAAATCAAGTGGGTGAGCCTGTTTGTAACGCATGTGGTCTGTACTTTAAGTTACACGGTGTTAAGAGACCACTTACAATGAAAAAGGATTCTATCCAGACACGGAAGCGAAAGCCCAAAGGTGGATCTAAAATAGAACCGGAACCTAAGAGAATCAAACAAGAAATACCGTCCGAGCATAACTATAGTGACTGTCACCGCACATCCGGCAGTGTTTTGAATCATGGCAGTGCTAGTTCGGGTCTTGCGTATACCAACTTGTACCAAACAGCCACGCATATGACACCTGCATACTATGACGTCATCAAGTCAGAGTCATCGCAAGAGTCTATCAACAGTCCACATATAGTAAGCCTTGCATCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAACATAAACACTGGCAACAAAGATAGGCCTAGTGTTCTAACCATGTCAGTTAATTCCTAA
- Protein Sequence
- MFCEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYFKMNGMNRPLVKQPKRLLVITGSCTYSSPVASGPSSSGSGDFYKGPLYHHVPASFARSSGAGGLEEKTTRRMQNASRRQGLQCTNCQTATTSLWRRNQVGEPVCNACGLYFKLHGVKRPLTMKKDSIQTRKRKPKGGSKIEPEPKRIKQEIPSEHNYSDCHRTSGSVLNHGSASSGLAYTNLYQTATHMTPAYYDVIKSESSQESINSPHIVSLASAXXXXXXXXXXNNINTGNKDRPSVLTMSVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184975;
- 90% Identity
- -
- 80% Identity
- -