Nrib024580.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- -
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010002501.1:25721-27448[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-13 4.1e-09 36.7 0.2 81 190 66 175 9 186 0.74 2 2 7.1e-07 0.012 15.5 0.2 248 311 200 267 192 270 0.91
Sequence Information
- Coding Sequence
- ATGATTGTGCTTAAAGGCATGGTGTTTTTTTTGACAGTATTGTCTGCGTCTGCATATAGAAAGTTGCAGGTTGAACACAACCCAGGTTGTCTAATGAAAGACATGTGTGCCAAAGTTTCAAAAGTAACATATATACGAGCCGATGGCAAGATGATACTATTCACTTTTTTAATTGATGTCACAAAGGACTCCATCGCTGGCCATTTCAATTTGAAAAATGACAATGATTTCGAGGAAATTAATTTAAAGCATCTTAAATGGAAAACAACTCGAATAATAAAGAAAAAGAACGAATCTGTTGAAATTGTTTTGTCTGCTGATACACATAGAGGGAGAGGCATTAATAAATTTGGACTTATAACTATTACTTTTAAATTGAGTGAGAATTATTTCGTCTCTGAGTCGCCATGTGTTTTTCATACTCCTGAATGTGGTGAACTTACATTTACACTAAATAATTTGTACACACATTTTAACAAATCACGTTTTGCAATAGAGTTACTTTCTAGTAGCTCTTATCAAACGAATGAGTATGAAGATTTATCAAATAATACATTTTCAAACTATTTGTTGAGTTCAAAATGTAATTTTGAAAAAGTACATACAGCAGAGTATGACATTCATGATCTCTATGAAAATGTCTATAAGAATGATTGGAAATATACAATTTTATATATAATATATGGAGAAACATTATTTAATTCTCAGTATCTATTTAAATCACGTAACCTATCATTTGGGATGGACAACGATGGGAATTCTAATAAAAACAATAATATATCCATGAAATTTTTAATTGGTGAAATCCAAACAAGAAGCTTGGTCAAAGCTTGGAATGTAACTCATCATGAACTTAATCATTACATGGTGTGTATAAATATAGTTTATTGTAGTTAA
- Protein Sequence
- MIVLKGMVFFLTVLSASAYRKLQVEHNPGCLMKDMCAKVSKVTYIRADGKMILFTFLIDVTKDSIAGHFNLKNDNDFEEINLKHLKWKTTRIIKKKNESVEIVLSADTHRGRGINKFGLITITFKLSENYFVSESPCVFHTPECGELTFTLNNLYTHFNKSRFAIELLSSSSYQTNEYEDLSNNTFSNYLLSSKCNFEKVHTAEYDIHDLYENVYKNDWKYTILYIIYGETLFNSQYLFKSRNLSFGMDNDGNSNKNNNISMKFLIGEIQTRSLVKAWNVTHHELNHYMVCINIVYCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -