Nrib013967.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- kn
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000257.1:85320-109351[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-95 1.7e-91 308.2 0.0 10 182 38 205 30 205 0.96
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCACCACCACCATCACCAGGATACCACGACGCCCGGTGGTATATCCGGACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCGGGGCCCCGTCACCGGGCTCAAAGAAGAACCTTTGGCCAACTCGCAGCTGTCCGTTCCCCGTTCATGGATGCAACCTTCCATCATCGATCAGAGCAGTATCGGCGTGGGAAGGGCACATTTCGAGAAGCAGCCTCCGAGCAATCTGAGAAAATCCAATTTCTTTCATTTCGTGATCGCACTGTACGACAGGTCTCAGCAGCCAATTGAAATCGAACGGACCGCGTTCATCGGATTCATCGAAAAGGATCAGGAATCCGAGTCGCAGAAGACCAACAACGGTATTCAGTATAGACTACAGCTGTTGTATGCTAACGGTGTGCGACAAGAACAAGACATATACGTGAGGCTCATCGATACCGTTACCAAACAGGCCATCATTTACGAGGGCCAAGACAAGAATCCAGAGATGTGCCGGGTGTTGCTCACGCACGAAGTCATGTGCAGTCGATGCTGTGATAAGAAAAGTTGCGGTAACAGAAACGAAACACCATCCGATCCGGTCATCATCGACAGGTAA
- Protein Sequence
- MFGLHHHHHQDTTTPGGISGLXXXXXXXXXXXLRGPVTGLKEEPLANSQLSVPRSWMQPSIIDQSSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169645;
- 90% Identity
- iTF_01169645;
- 80% Identity
- -