Nvit002247.1
Basic Information
- Insect
- Nasonia vitripennis
- Gene Symbol
- ZNF131
- Assembly
- GCA_009193385.2
- Location
- NW:2570022-2627977[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.64 54 4.0 2.1 1 21 11 31 11 32 0.92 2 17 5.3 4.5e+02 1.2 0.4 3 23 342 364 342 364 0.85 3 17 1.4 1.1e+02 3.0 0.5 2 14 410 423 410 424 0.88 4 17 3.6 3.1e+02 1.7 0.2 2 23 445 465 444 465 0.90 5 17 0.023 2 8.6 0.9 1 23 534 558 534 558 0.91 6 17 5.2 4.4e+02 1.2 2.0 2 19 580 597 579 603 0.85 7 17 0.0065 0.55 10.3 0.4 2 23 618 640 617 640 0.95 8 17 0.035 3 8.0 2.2 1 23 661 685 661 685 0.93 9 17 0.0041 0.34 11.0 0.4 1 21 730 750 730 751 0.95 10 17 0.00014 0.012 15.6 2.5 1 23 810 831 810 831 0.98 11 17 0.0056 0.47 10.5 0.4 1 21 837 857 837 858 0.95 12 17 0.0025 0.21 11.6 1.7 1 23 874 896 874 896 0.98 13 17 0.0047 0.39 10.8 0.4 1 23 901 926 901 926 0.96 14 17 0.0002 0.017 15.1 0.8 1 23 936 958 936 958 0.99 15 17 0.0086 0.72 9.9 2.9 2 23 971 994 970 994 0.95 16 17 0.00094 0.079 13.0 1.2 1 21 1000 1020 1000 1025 0.94 17 17 0.8 68 3.7 1.2 1 23 1031 1055 1031 1055 0.93
Sequence Information
- Coding Sequence
- ATGCAGAACTTCGAGGACGAGGACGACACGCACTTCTGCAACAAGTGCCACACGACGATCAACGGCCTGGAGAACTATGTCCGTCACCGACAGTCCGGTTGCCGCACCTGCACCGAGGGGGACAAGCCCGTGTCCGTGTACCACAGCCCCGTGTCGACGCCCAACGTCCGCTACCCCGAGATCCTCAACGCGGACGCCTTCTTCAGCTCGCTGGAGCTGCAGTCGAGTGCCAAGCCGCAGCCGCAACGCCCTACCGACCTCCTGGACACCAAACTCCGGAGGTCCGGTCGGAACGAGGAGCGCAAGAGGAAGCGCATGCGCAAGGACAAGAGCCCAGACGAGAAGCCGGAGGAGAGCAAGCCCAACCTCATGCCGGTCGTTACCGATCTCGACGACCTCGGCATACCGTCCCTCGTCGGCTTCCCCGAGATCGTCAGCACGGCCAGCAAGCAGGCCAGCAGCGCCGTTCCCAGCGGCAAACTCGCCGGCAGCTCGGGAGTGGCTGCGGGAGGAGGCGCCAAGGCCGAGAGAAGCGCTACCGATCGGAAGCGCGCCGACTGGCTCGAGGACACGATACTCACCGATCTCGCGGAGACCAAGGAGGAGCTGCGCAACCTGGACAGCTACGCCGAGTACGACTACGCGCAGCATGACGAGGACTCGGACGACGAGAGCCTCGACGTGGACATGGTCGAGGAGGAGTTCTACTCCGAATCCGACGACCCCGAGCACGACCAGGAGTATCCCCCGCGGAGTCACACGGGGGGCAAGTGGAGACCCGAGGGCATCTCCTCGCAGGAGGAGGCAGCGactgcgcagcagcagcaggtcaACGAGGACGAGGCGGAAGCGGACGAACCGGCGCATCCGCCGCCCACTCACACCGGGGGCAAGTGGAAGCCCAGCTACGTCCAGCCAAAGTACGAGTACGAGAGCAGCAAAGACGCGCAGCAGCCACCGCCGGGTCACACGCGCGGCAAATGGGTTCCGGGAGCCGGGGCCGATATCGGCGCGGGATATTGGTGCAGTCCCTGCGGTCGGAAACTGGCCTCCCGGCTGGTTTACAACCGGCACCTGCGCTCCGATCTGCACGCCAGAAGAAGCATGCAGGAAATCGACGGAGCCGTGCAGCCGCGGGGCGTCGCGCTCCCGCTCCCCCGccgccagcagcagctcagCCAGCGGCAGAAAGTCCTGGCCACGATGAAAGGCGAATCGTCGCCGGCCACGTGCGAGGCGGACTGCGGCAAGAGGAGCAGCAGGAAGAGGCAGCGGCCCCGCGAGGAACGAGGCcagaagaagcagaagcggCGACGGGAGAAAGAGCTGCTCTCGTGCGAGATCTGCCGGGCTCGCGTGCGCCGCGCGCAGATGGGCAAACACCTTCTCTCGCACTATCACTGCCGCGTCGCAGGTGCCATGCCGAGCGGCTGCACGCAGGCCGCTCGCCGCTTCCTCCTGGAGAACATGGCGAACATCGTGCGCCAGTGTCCCTTCCAGTGCGGCCCGTGTCGCTTTTATTGCAACACCGGCGACACCTTCCTGCGGCACTGGAGATCCGACGCGCACCGGAACGCGGTGTCTAAGATAGCGGGCAGCTTCGTGTGCGCCCTCTGCGACTTCTGCTGCGATGATAATGAGAGCGTCGAGGCGCATATAATGAAGCAAGGCCATCAAGATGTGGTCTCCATGATAAATGGCTCCGTACCGATAGTCATTCGTCGCCAGCGCGTGCTCACGTGCCCAACCTGTTGCCGCCGCTTTAGGTACAACATACAGCTCCGCTTCCACGCCAAGGAGACGGGCCACGAGATCTGTCAGTCCGCCTCGGACGAGTACCAGCGTCGGCTGAGCTGCGGCCTCTGCGGCCAGATCGTCCGCTCGCTGATAGCGCTGCAGCGTCACCAGCTCTCGTGTCACAAGGCCGTCGCGCTGAAGAGCGAGCAGGTCAAGTCCGACGACGAGGCCGAAACGACGCCCTACTTCTGCTCGTTCTGCTCGGTGTCCTTCAAGACGGCCCACGACGCGGTCCTCCACAGACGGACCTCGAGCCACAAGGAGACCGTCAGGAGCAAGAGGTCCGGCGACGGCCAGGAGACGAGGCGGGCCTGTCCCCACTGCGAGGTCAAGCGGGAGAACCTGGCGGAGCACAGGAAGCATCTGCTGGAGGAGCATTCGGAATTGTGCCACAGGTGCGCCAAGTGCGGAGAGCGGTTCGCCCTGTCGCAGGACGTGACGAGGCACACGCGCGAGAATCGATGCTGTTCCCAGGAAGAAAAGCCGTCCAGCTCTGCAGTAAAAGCAGAACAATGGAGCTGCGACGTCTGTACGTTTGCGAGCGACTCGGGGGCAGAATTTCTGTTCCACAAGATCCTCCACGACGGCCCGGTAGAGCGCGAAGAAGCGGCCAAGTCGACGCAGCCGTGCTACGTGTGTCCGCTCTGCGAGAGGACGTTCCGGAAGTGCGCGCTCAGGGACCACCTGCGGAAGCACACCGGCGAGAGGCCCTTCCCCTGCGGCAAGTGCTCGGCCACCTTCGCCAGGAGGTCCGATCGGAAGCTGCACCAGAAGAACTGCCAGGGCGCCGAGGGGCCGGTCATTCGAGCCAAGGAGAGGAAGTACATCTGCAACGAGTGCGACGGCGCGTTCTACACCAAGCACATTCTGCGACAGCACATGACGCGACACGCCGGGAAGCAGTACAAGTGCGGGCTGCCCGGCTGCCCGACGATCCTGCGCACCGAGACCGAGCTCAAGCATCACCGGAGGCTCGTCCACGACAGCGGCAGCGATCAACGACGTGAGTTCCAGTGCGGCGACTGCTCCTACGCCGCCAAAACCAAGGTCCAGCTCGTGAGGCACAGGAAGCGACACGAGCTATCGGACGACGAGAACAGCGGACAGTCGCTCAAGTGTCAGTACAGCGGTTGCAACTTCACGACGAGGATCAGCTCGCACCTGAAGCGACACGTCCGCCTGCACACCGGCAAGAAGCCGTACAAGTGCCGTCACTGCCCCTACGCGAGCAACAATCTGgAAAATCTGCGAAAACACGTTCTATCGACGAACCTGCATCCAGGCAAAATGATATATCAGTGCGAATCCTGTGGAGCTTATCAGACCAACTTCTCGAAGGAACTTCGGGCGCACTTGCTTCACTCCCATCCCGACGAGTATCCGACTCCGAGCGACGCGAGCAATTACATCGCTACCATTTTCGACGAGGCCAGCGGCGCGGATTTCTAG
- Protein Sequence
- MQNFEDEDDTHFCNKCHTTINGLENYVRHRQSGCRTCTEGDKPVSVYHSPVSTPNVRYPEILNADAFFSSLELQSSAKPQPQRPTDLLDTKLRRSGRNEERKRKRMRKDKSPDEKPEESKPNLMPVVTDLDDLGIPSLVGFPEIVSTASKQASSAVPSGKLAGSSGVAAGGGAKAERSATDRKRADWLEDTILTDLAETKEELRNLDSYAEYDYAQHDEDSDDESLDVDMVEEEFYSESDDPEHDQEYPPRSHTGGKWRPEGISSQEEAATAQQQQVNEDEAEADEPAHPPPTHTGGKWKPSYVQPKYEYESSKDAQQPPPGHTRGKWVPGAGADIGAGYWCSPCGRKLASRLVYNRHLRSDLHARRSMQEIDGAVQPRGVALPLPRRQQQLSQRQKVLATMKGESSPATCEADCGKRSSRKRQRPREERGQKKQKRRREKELLSCEICRARVRRAQMGKHLLSHYHCRVAGAMPSGCTQAARRFLLENMANIVRQCPFQCGPCRFYCNTGDTFLRHWRSDAHRNAVSKIAGSFVCALCDFCCDDNESVEAHIMKQGHQDVVSMINGSVPIVIRRQRVLTCPTCCRRFRYNIQLRFHAKETGHEICQSASDEYQRRLSCGLCGQIVRSLIALQRHQLSCHKAVALKSEQVKSDDEAETTPYFCSFCSVSFKTAHDAVLHRRTSSHKETVRSKRSGDGQETRRACPHCEVKRENLAEHRKHLLEEHSELCHRCAKCGERFALSQDVTRHTRENRCCSQEEKPSSSAVKAEQWSCDVCTFASDSGAEFLFHKILHDGPVEREEAAKSTQPCYVCPLCERTFRKCALRDHLRKHTGERPFPCGKCSATFARRSDRKLHQKNCQGAEGPVIRAKERKYICNECDGAFYTKHILRQHMTRHAGKQYKCGLPGCPTILRTETELKHHRRLVHDSGSDQRREFQCGDCSYAAKTKVQLVRHRKRHELSDDENSGQSLKCQYSGCNFTTRISSHLKRHVRLHTGKKPYKCRHCPYASNNLENLRKHVLSTNLHPGKMIYQCESCGAYQTNFSKELRAHLLHSHPDEYPTPSDASNYIATIFDEASGADF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -