Basic Information

Insect: Nasonia vitripennis
Gene Symbol: -
Assembly: GCA_009193385.2
Location: NC:3015877-3018937[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.8 1.5e+02 2.6 0.2 1 23 329 352 329 352 0.89

2 10 0.0014 0.12 12.5 2.8 1 23 359 381 359 381 0.98

3 10 0.0012 0.1 12.6 4.1 1 20 387 406 387 409 0.96

4 10 1.9e-06 0.00016 21.5 1.4 1 23 415 437 415 437 0.98

5 10 2.4e-06 0.0002 21.1 3.4 1 23 443 465 443 465 0.98

6 10 0.00011 0.0095 15.9 1.1 1 23 476 498 476 498 0.98

7 10 1.6e-08 1.4e-06 28.0 0.6 1 23 504 526 504 526 0.99

8 10 1.9e-06 0.00016 21.5 0.6 1 23 532 554 532 554 0.95

9 10 3.1e-05 0.0026 17.7 0.2 1 22 560 581 560 582 0.92

10 10 3e-06 0.00025 20.8 0.3 1 23 588 610 588 610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.8	1.5e+02	2.6	0.2	1	23	329	352	329	352	0.89
2	10	0.0014	0.12	12.5	2.8	1	23	359	381	359	381	0.98
3	10	0.0012	0.1	12.6	4.1	1	20	387	406	387	409	0.96
4	10	1.9e-06	0.00016	21.5	1.4	1	23	415	437	415	437	0.98
5	10	2.4e-06	0.0002	21.1	3.4	1	23	443	465	443	465	0.98
6	10	0.00011	0.0095	15.9	1.1	1	23	476	498	476	498	0.98
7	10	1.6e-08	1.4e-06	28.0	0.6	1	23	504	526	504	526	0.99
8	10	1.9e-06	0.00016	21.5	0.6	1	23	532	554	532	554	0.95
9	10	3.1e-05	0.0026	17.7	0.2	1	22	560	581	560	582	0.92
10	10	3e-06	0.00025	20.8	0.3	1	23	588	610	588	610	0.98

Sequence Information

Coding Sequence: ATGACCTGGGAAATAAGCTGGGCCGACATGTGTCGCGCCTGCATGGAGGTCGAGGGTGAACTGCTGCCCCTGTACGACGAGCAGAACGAGGCGGAGGAGAACGATCTGCCTGGGAAACTCGCCGAACTAGCTGGAATTGAGATCAACAGATCTGACGGCCTACCGACGAAACTCTGCGCGAAATGTGCCTACAATACTAATGCATTTTTGGAGTTCAAAAACTTGGTTCGAGAAAGCGATCAGAAGCTGAGGGATATGTTCAGCGAACAAGTGGTTTCCGATACAAGGGACGACGAAGCGGATGACCAAACAAACAATGAAGTAGAAAATTCTTTGCCCCAAGATAAGGAAGTTTACATCTCCATTGATGATAAGGACATTAGATTGTACAGCGAGAATATGGAGAATATTAACTTGGATGAAGTATTAGGAACAACCGAAGAGAATGTCAGCAGTGGCCCTGTTGTAGTGGACAATTTAGAACAAGTAGCAATAGAGTTAGAAAAGAATGACACGGTCATTTTGAAGCTAGATCCAAGTGCCAACAAGACTCTCGGAGTCAATGAGGAATTGCAAGATCTGCATGTTGTATTCCATAAAGATCAGGTAGCTGATATTGAAAGAATAGCCCAAACAGAGCTGAGTGAGAATCAAAACAATTGTGGAATTGAAGAACCAGAAGCCACAGCTTCTGAGCAACAGACATCAGTTCCTGATGAAGAAACAGTGTCTTCCGAAGTGGataagttaaaaattaaaaaaattagaaaaactaAGAATAGCGTTAAAAAAGCATTGGAGAAAATTGTAGATGAAGCAATCGAGGGTGAAACACTGAAGGAGGCTGATGAAGATGAAAGTCAGTCTCAGGACAATGATAGTGATTCTGATTGTGAGGAGAATGGCGGTGAAAATGTTGTAGGCAGTCTCAATGATACGATAACTAAAGTAAAGGAAATCAAGGAAGGAGGAAAGGTTGTGCAGCACCAGTGTACGTTATGCCTACAAAATTACCCAGTACTTTCAGAAGCCCTGAATCATATAGTGAATTTACATGTGCCAAGTACAGGGCCATTTTACTGCGTGGTTTGCGAAAAGGATTGCGATAGCATGAAGCACTTGAAAGCGCATATTAAAGTACACAAAGGCCCAGCTCCCTATAAATGCTTCTTATGCAACAAAGCGTACGTAATGAAGAGGTATCTGAAAAGACATATGGCTTGTCATACAGAATTTCCCAAACATCGGTGCTCAAAATGTGGTGAGAGATTCAAAGTCAAGAGTGACTTGGAAGATCATATTTTATCTCATGGGAGAGGGGCACCTTTCAAATGCAGTCAGTGTCCTAGAGTATTTAATCATAAGGGTAATTACAAAAGACATTTGATTTCTCATCTTGACCCTCAGGGCCTCCATCTGCCAAAATTTCCATGTACAGTTTGTAAGAGAAGGTTTTTGAATAATCGCACTCTTGTCACGCACATGCGGGTACACACTGGAGAAAAACCATTCAAATGTGATAACTGTGGCAAAGCATTTTCACAGCAGGGCAATCTTTTGAATCACCAGAAAATTCATTCAAATCCAAGATGCTTCACGTGTGAAGTTTGCGGCAAAAGTTTTAATCAAAAGGCTACTTTGAGAGATCACAGTTTACTGCACTCTGGAGAAAAACCTTACGTCTGCAATGTCTGTGGAATGGCGTTTACGTTTACCGCTTCTTTGCGCCGTCATATATGGACACACACAGATGGCAAACCCTTTGAGTGCGATATATGCAATGCACAGTTTGTTGGAAGATACGATCTCAAACGTCATATGAAAATCCACAATGGAAAACCCAGTGCAAGATCCAAATCAAAGCGTAGGAAAGTTCAAAGGGAAGAAAGCATAGAGGACGAAGACCAACAAGCAGAAATGATCAATATCGTAGAAGAAGACCCGTTAGGCGGTACAGATACTATTTTTGTTGAACAGATATTTGTGTGCGACGATGCCATTCAGATTGTTACCCAAGGAGAATCTGAAAAGGAAAACGTCGATTCAATGATTGGCCTAATcgaatattcataa
Protein Sequence: MTWEISWADMCRACMEVEGELLPLYDEQNEAEENDLPGKLAELAGIEINRSDGLPTKLCAKCAYNTNAFLEFKNLVRESDQKLRDMFSEQVVSDTRDDEADDQTNNEVENSLPQDKEVYISIDDKDIRLYSENMENINLDEVLGTTEENVSSGPVVVDNLEQVAIELEKNDTVILKLDPSANKTLGVNEELQDLHVVFHKDQVADIERIAQTELSENQNNCGIEEPEATASEQQTSVPDEETVSSEVDKLKIKKIRKTKNSVKKALEKIVDEAIEGETLKEADEDESQSQDNDSDSDCEENGGENVVGSLNDTITKVKEIKEGGKVVQHQCTLCLQNYPVLSEALNHIVNLHVPSTGPFYCVVCEKDCDSMKHLKAHIKVHKGPAPYKCFLCNKAYVMKRYLKRHMACHTEFPKHRCSKCGERFKVKSDLEDHILSHGRGAPFKCSQCPRVFNHKGNYKRHLISHLDPQGLHLPKFPCTVCKRRFLNNRTLVTHMRVHTGEKPFKCDNCGKAFSQQGNLLNHQKIHSNPRCFTCEVCGKSFNQKATLRDHSLLHSGEKPYVCNVCGMAFTFTASLRRHIWTHTDGKPFECDICNAQFVGRYDLKRHMKIHNGKPSARSKSKRRKVQREESIEDEDQQAEMINIVEEDPLGGTDTIFVEQIFVCDDAIQIVTQGESEKENVDSMIGLIEYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01274741;
90% Identity: iTF_01036471;
80% Identity: -