Nvit006368.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nasonia vitripennis
Gene Symbol
ZNF236
Assembly
GCA_009193385.2
Location
NC:11591585-11606951[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 5.6e-06 0.00047 20.0 0.9 1 23 184 206 184 206 0.98
2 26 0.00011 0.0097 15.8 1.6 1 23 212 234 212 234 0.97
3 26 6.9e-06 0.00058 19.7 0.2 2 23 240 261 240 261 0.97
4 26 0.00019 0.016 15.2 0.7 1 23 267 289 267 289 0.97
5 26 0.00061 0.051 13.6 2.1 2 23 300 321 299 321 0.97
6 26 2.1e-06 0.00017 21.3 0.7 1 23 342 364 342 364 0.99
7 26 0.00013 0.011 15.7 0.9 1 20 370 389 370 392 0.96
8 26 2.3e-05 0.002 18.0 0.4 1 23 398 421 398 421 0.96
9 26 0.00011 0.0089 16.0 2.0 1 23 430 453 430 453 0.98
10 26 1.2e-06 9.7e-05 22.1 2.4 1 23 546 568 546 568 0.99
11 26 3.7e-05 0.0031 17.4 2.9 1 23 574 596 574 596 0.97
12 26 0.00054 0.045 13.7 0.5 1 23 602 624 602 624 0.95
13 26 0.0081 0.68 10.0 2.6 1 23 628 651 628 651 0.97
14 26 0.00068 0.057 13.4 3.9 1 23 712 734 712 734 0.98
15 26 1.6e-08 1.4e-06 27.9 0.3 1 23 740 762 740 762 0.98
16 26 0.00013 0.011 15.7 3.4 1 23 768 790 768 790 0.98
17 26 0.00017 0.014 15.3 5.7 1 23 796 818 796 818 0.97
18 26 0.0038 0.32 11.0 0.9 1 23 1136 1158 1136 1158 0.93
19 26 0.00095 0.08 12.9 2.5 1 23 1164 1186 1164 1186 0.97
20 26 3.1e-08 2.6e-06 27.1 1.2 2 23 1220 1241 1219 1241 0.98
21 26 4.8e-05 0.004 17.0 2.7 1 23 1247 1269 1247 1269 0.99
22 26 4.4e-06 0.00037 20.3 1.1 3 23 1277 1297 1275 1297 0.98
23 26 0.00057 0.048 13.6 2.6 1 23 1303 1325 1303 1325 0.98
24 26 6.1e-07 5.1e-05 23.0 0.8 1 23 1518 1540 1518 1540 0.98
25 26 2.1e-07 1.8e-05 24.4 3.4 1 23 1546 1568 1546 1568 0.99
26 26 2.1e-07 1.7e-05 24.5 1.7 1 23 1574 1597 1574 1597 0.97

Sequence Information

Coding Sequence
ATGGAGGACATGGGGTTCATGAATATGCTCACTGATGATGGCACTACATTAGTGTCTGTGCACCAGAGAGACGATGGAAGTTTGGAACTTGTATCAACGCCAGTGACAATCATACAGGATCCGTGTAATGGTCCTGTGCAGGAGCTAAATGCTACTAATGCagagtttatttttaatcaaATTAAGATCAACAACACTTCGATCAATCTTCCAGAGATTATTCAACAACCTAACATAACTTCCATCGATGTGATAAATTTGAATTCTCAAATTGTACAAGTGGCCAGTGATCCGCAGTGTTGTATTGCAAAGACATcgaataatttattacctgACAATGTACAAGAAATATCAAATGTAGAAAATAGCACAGCAGTAAGTACTGTAGATGTAGaaagagaagaggaagaagtaCAAAATGAATCTCCAGAAATATTACAAGAATCTACGAGTCCTGAAAAAGACTCTTCATCTTCTAAACAGCATAACCATAAGAGTCTTGGCAGCCCAAAAAAACACAGCAAAAATGCTAATGGAGTGacAGTATATTTCAAGTGCGACATCTGTGGTTTGGGATTCCGGAAACAGTACTTGATGCAAAAACATATGCAAGAACACGCGCAAGAGAAACCACATCACTGTCCAAAATGTCCTGCATCATTTAATGTTCCAACCAATTTCACTTTGCACATGGCGACTCACAACGTAGGTGAGCCAAAATGCCCACAGTGTGGACGAAGATTTGCACGTATGGCCAGTCTCAAAGCTCATATGGTGGTACATGAGGTGGATGAGAACCACTATTGCACCGAGTGTGAAAGTGTTTTTGAAACAAAGGCCCAGTTGGAGGCCCACTTGAAGCTGCACAACGAGAAATGGTCAGCGGACGACTACAAGCGCTGCAAGCTCTGCCGCAAGCAGTTCACCCAACCCGTCCTCTATCGCCAGCACTTACGCGATCACTACAAAATGCAGACCAAGTGCCCCAAGCAGACGAAGCGCGGGGTCACGTTCGGCACTATTTACAAGTGCAGACTGTGTCTGAAGTCCTTCGAAAAGCCCAGTCAACTGGCCCGGCACATCAGGGTGCACACCGGCGAGAAACCCTACAAGTGCAATCTGTGCAGCCGAAGCTTTTCGCAAAAGGGCTCCGTGAGGATTCACATGTGGCAGCACAACGGCATCAGGCCTTACAGCTGTTCCCTTTGCAAGGCTAAATTCAGTCAAAAAGGCAACTTGAACGCACACGTGCTGCGAGTGCACAAGATCCAGGGAGGCGCGCCGATCTACCGCTGCACGCGCTGCCCCTGTGTTTTCAAGAAGCTCGGCAGTCTGAACGGCCACATGAGACGAGCGCACGCCGGCGCCGAGGATGGGACCACCGAGGAAACCGCCGAGGAGGTCCAAGAATCTCAGGAGACGACCGTTGACCCCACCGAAAACGTGGTAGATACACCGTCGGAAGCAGAACCGAGAGCGGAGACGACGGAACTGCCCAAGGACGTTGAGGATGGTTTCGTTCTCACGGATGACAAGGAGCAGACGGCCGTCGTTACGCTTTTGGATAAGGTTGCCAATGATGCCAAGGGGAAGTACGTTAAGCTGAAGCAGCGGTTTGTAAATAACTGTATACAGTACGAATGCGATTTCTGTGATAAAACGTGCAAGAAGCCATCGGACCTCATGAGGCATTTGAGGGTACACACGCGGGAAAGGCCTTTCAAGTGCAAGACGTGCGATCGATCGTTTACCCTCAAGTCCACCTTAATGACGCACGAGAAGCTTCACGAGAATGCTGGAAAGTACAAGTGCCAAAACTGCGACATGGCTTTCAATACGGAAAATGCTCTCAGAGCTCACGACAAAACTCACAACAAAGTTCACAAATGCATGATCTGCGTAAAAACCTTCTCGAGCTTCGAGCGTTTACGGGAGCACTCCATGACTTTGCACATGGGCCGCAAGGTCCAGTCGAGCCGTCAGAAAACGCAACTGCCATCGGAAGTGCAGAACCTAACGCCCAAAGTCGTGTTGAAGGAGCCGCTCGTCTTAACCGAGCTTAGCAGCGGTTTGCTTCACGCCCAGCCCAAGTTCGCGAGGACCAGCAAGCTGGCCCATATCAAGGGAAGGCCCCACAAGTGCCAGACCTGTGCAGCCGCTTTTACTAAACTCAGTCATCTTAAACAGCATGTTCGAATGCATACCGGGGAAAGGCCGTTCGTCTGCCCTATTTGCGACAGGAGTTTCACGACTAACGGCGCCCTTAAAGCACATCGCCGTACGCACGACATGCTAAAACCTTACCAATGTACGATATGTAGCATGAATTTTTCTACCTTGAGTAGTATGAAGAGGCATCATGTTACGCACAGCAATAAAAGACCATTTATGTGTCCGTACTGCAATAAAACCTTCAAAACGACGGTGAACTGTAAGAAGCACATGAAACTACATAAACAAGAAATCGCGCAACAGCAAATAGAGAGCCAGAAGAAACAGCAACAGCAGTCTTCAAATTCGGATGCAATAGAGACAATTCCTGCGACAGAACCAACCACTACCATTAATCAGCAAATCACTTTTAAGCCTATAGCAACTGACATAACGCAAAACTTGAATGAACAACTTCAAATAATGAACAACAATAATGCTCCTGAATCGAATTCTACGTTATCTCAAAATATACACGTATCGTGTCAGCAAGAAAAGAATATATCCGTAGTAGAAAACTCTAACATAGGTTCGACCCAAACATTGCATGCCGACGAGACCGGCACTATTACCCTATCTAACTATACGGGTGACCCGACACTTACACCTGAAAGTATTAGAGTAATAGAAGAAACTCTGAACCAACAATTATCTAATATCGGACTAAACATGGCACTTAACAGCAGCGTTAGGCAGATTGAGGAACATAATAGTACTTCTACAGTTAACAGGGATCAACCAACGTTGAGCATTATTTACGACAAAACTGTGGCATCACCTATGAATACGAATACCATGAGTACAAATGTTTTTTCTCCCCAATACGAAGGTTTTGATATCAATCAAATAACTCTACAGGGTGACAATGAAATTGATTTGGGAATAATACAAAACAATTCGTCACAGACGACGAATATTTTACCAAATATGatacaaaatcaaaattacaGTTTGCAATTTCTCAATAATGATCTTTACGTGAATACAATTCTTAAACAAAGCCAAGTGAATCAGTTAAAAGACAATAATCATTTGCATGAATCGATGAAAGTCGTAACAAGTGATCAAGTTTGTAGTGACGCGAATAAAGCTTCggacaaagaaaataatttacaatgtCATTTGTGCAACATGCAAGAATTAAGTATTGACGACTTAAAGGAACATCTTAAAACTCACCAAGAGCCTAAAGAATTTGAATGCATCCAATGTCTTGCGAAATTTCGTACTACTGCAGGCCTCAAGAGGCATATGAAGACTCACGAGACACAGGAGACTCATAAATGCTACGAATGCAATCAAGAATTTTCTACGACGTTGCAGCTTAGAGAACATATAAAAGAGCATGTCAAACACGaattaaaactgaaaaatgtaGTGGATGCTGATTGTATGcctaataatattaaaaaaggaaaaaaagacAATACTGCCAATAAGGATAACAAATGTCAATACTGCCCAAAGACCTTCCGAAAACCCAGTGATCTCATAAGGCATATTAGAACGCATACCGGTGAGCGACCATATCAGTGCCAATATTGCGATAAGAGTTTTGCTGTTAAGTGCACATTGGATTCTCATTTGAAAGTACATAAAGGCGATAAATTGTTCGGTTGCAATGTGTGCAATACCATGTTTACAACAAAGAGCAGTCTCAAAGTTCATTTACGACTCCATACAGgaGCTAAACCATTTAAGTGTTCGATTTGTGACATGCAGTTTCGCACCTCCGGCCACCGTAAAGTTCACGAGATGTCCCACATGCGGGAAAGTAAACCCATAGACCAGCCAACTTTGATTGACGGAAGTTTAGACTCGGTAAATACCGTAGAATCAGCAGAATCACCTACTGACACCCGAATTGTGCAAATCGTACACACAGTGCCTGTTCATCAACAATTAGAACAACAAAACGCGAATCTCTTCAATTTCAATTCTAACAACATTACGATAAATCCACAACAAGTAAGCTTCAGCATGGATGATGGATCGAGCCTGTTGAGTTTGAACGAAAACAATCAGTTAGTGGCGAATCTAGACTTTTTACTGGCTAACGGCTTGGTCAATATATCATCTGAAGGTCTGCAGTTGACTGACGATTATGTCGCGCAGAAGATGCAAGAAGAGCCAAATGATGCTGATGCACAAGTAATCTTTGCGAGTGAATTGCCGGTCACGGATGTACAAATAGCACAAGGGATGCATCCAGATCCGAGTAGCATCGATATGGAAAACTGCATGGTTCTGCCGTTAGAAAACTTCGATTCTTTTTTGGAAGGGAAAAATGATGAGGATGAACTAAAAGAGGATGATAGCCCAAGtaCGACAGGACCACGCTACGACTGTGAAATTTGCGGTAAATCGTTCTCCAAACCTTGTCAGGTCGAGCGGCACATCCGCGTACACACAGGTGAACGTCCATTTAAGTGTGAAACTTGCAACAAATCATTCTCCCAGAAATCATCATTACAATTACATCAAAAAAGTCACACCGGCGAACGGCCTTACGCCTGTCCACATTGCGATCAATCGTTTACTCAAAGCGGTAACCTTCAGACCCATGTGCGTCGTAAGCACAAACTTGAGTCTGGAAAACGCCAACAGTTTGTCaatgttaattattttgatcCGAATAAAATTCTAACGTCGGAACAGCAGCAACTTATGTTTGATAGATCGATAGGGTTTGAGGATATGTCGATCGTTGAGTTGCTTAATTGA
Protein Sequence
MEDMGFMNMLTDDGTTLVSVHQRDDGSLELVSTPVTIIQDPCNGPVQELNATNAEFIFNQIKINNTSINLPEIIQQPNITSIDVINLNSQIVQVASDPQCCIAKTSNNLLPDNVQEISNVENSTAVSTVDVEREEEEVQNESPEILQESTSPEKDSSSSKQHNHKSLGSPKKHSKNANGVTVYFKCDICGLGFRKQYLMQKHMQEHAQEKPHHCPKCPASFNVPTNFTLHMATHNVGEPKCPQCGRRFARMASLKAHMVVHEVDENHYCTECESVFETKAQLEAHLKLHNEKWSADDYKRCKLCRKQFTQPVLYRQHLRDHYKMQTKCPKQTKRGVTFGTIYKCRLCLKSFEKPSQLARHIRVHTGEKPYKCNLCSRSFSQKGSVRIHMWQHNGIRPYSCSLCKAKFSQKGNLNAHVLRVHKIQGGAPIYRCTRCPCVFKKLGSLNGHMRRAHAGAEDGTTEETAEEVQESQETTVDPTENVVDTPSEAEPRAETTELPKDVEDGFVLTDDKEQTAVVTLLDKVANDAKGKYVKLKQRFVNNCIQYECDFCDKTCKKPSDLMRHLRVHTRERPFKCKTCDRSFTLKSTLMTHEKLHENAGKYKCQNCDMAFNTENALRAHDKTHNKVHKCMICVKTFSSFERLREHSMTLHMGRKVQSSRQKTQLPSEVQNLTPKVVLKEPLVLTELSSGLLHAQPKFARTSKLAHIKGRPHKCQTCAAAFTKLSHLKQHVRMHTGERPFVCPICDRSFTTNGALKAHRRTHDMLKPYQCTICSMNFSTLSSMKRHHVTHSNKRPFMCPYCNKTFKTTVNCKKHMKLHKQEIAQQQIESQKKQQQQSSNSDAIETIPATEPTTTINQQITFKPIATDITQNLNEQLQIMNNNNAPESNSTLSQNIHVSCQQEKNISVVENSNIGSTQTLHADETGTITLSNYTGDPTLTPESIRVIEETLNQQLSNIGLNMALNSSVRQIEEHNSTSTVNRDQPTLSIIYDKTVASPMNTNTMSTNVFSPQYEGFDINQITLQGDNEIDLGIIQNNSSQTTNILPNMIQNQNYSLQFLNNDLYVNTILKQSQVNQLKDNNHLHESMKVVTSDQVCSDANKASDKENNLQCHLCNMQELSIDDLKEHLKTHQEPKEFECIQCLAKFRTTAGLKRHMKTHETQETHKCYECNQEFSTTLQLREHIKEHVKHELKLKNVVDADCMPNNIKKGKKDNTANKDNKCQYCPKTFRKPSDLIRHIRTHTGERPYQCQYCDKSFAVKCTLDSHLKVHKGDKLFGCNVCNTMFTTKSSLKVHLRLHTGAKPFKCSICDMQFRTSGHRKVHEMSHMRESKPIDQPTLIDGSLDSVNTVESAESPTDTRIVQIVHTVPVHQQLEQQNANLFNFNSNNITINPQQVSFSMDDGSSLLSLNENNQLVANLDFLLANGLVNISSEGLQLTDDYVAQKMQEEPNDADAQVIFASELPVTDVQIAQGMHPDPSSIDMENCMVLPLENFDSFLEGKNDEDELKEDDSPSTTGPRYDCEICGKSFSKPCQVERHIRVHTGERPFKCETCNKSFSQKSSLQLHQKSHTGERPYACPHCDQSFTQSGNLQTHVRRKHKLESGKRQQFVNVNYFDPNKILTSEQQQLMFDRSIGFEDMSIVELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00286637;
90% Identity
iTF_01036451;
80% Identity
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