Nvit006688.1
Basic Information
- Insect
- Nasonia vitripennis
- Gene Symbol
- bab1
- Assembly
- GCA_009193385.2
- Location
- NC:10854938-10975650[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-17 2.2e-14 52.4 0.0 1 43 401 444 401 446 0.95 2 2 2.6 2.8e+03 -2.4 0.8 6 15 523 532 519 533 0.87
Sequence Information
- Coding Sequence
- ATGACGCAGCAGAGCGGAGCCGGCTCGCCGCAGCAGTTCTGCCTGCGCTGGAACAACTACCAGACCAACCTGACCAACGTCTTCGACCAGCTGCTGCAGAGCGAGAGCTTCGTCGACGTGACGCTCGCCTGCGACGGGCACTCGGTCAAGGCCCACAAGATGGTCCTCTCGGCCTGCAGCCCCTACTTCCAGGCGCTCTTCTTCGACAACCCCTGCCAGCACCCGATCGTCATCATGAAGGACATCAAGTGGCCGGAGCTCAAGGCCGCCGTCGAGTTCATGTACAAGGGCGAGATCAACGTGTCGCAGGAGCAGATTGGCCCGTTGCTCAAGGTCGCCGAGAGCCTCAAGATCCGCGGCCTGGCGGACGTCAACAGCGAGCACGAGCTCGCCTCCCGGGCCGGCCTCGACGACTCGCTCAACTTGGCCAGCGCCGCGGCGGCCAGCAGCCTGCaggcccagcagcagcagcagcaacgcaaGAAGCGCCGACTGGCCTCGGGCGATCGCTCGCCCAGCGCGGGAGGCCTCAGCCCCGACGCCCGGGCCTCGGACCGCGACGAGCAGGACTCGGCCTCTACGGGCCACGAGAGCCACGGCCTCGGCAGCTCCTCGACGCCGCGCTCCCTCGGCTCGCCCTGCAGCGTCATGCCCAGCATCAGCGTCACGCCGCAGATCAACCTGCAGGAGCTGCCGGTGAGCCTGCCCCTGCCGCCTCCGCCACCGCTGCCGCCACCCGGAGGCTCCTCGagccagcagcaacagcagcaacagagcGCGCAGCAGTCGCCGCACCCCTCGCTGCTCGGCCACCACGTGTCGCCCGGCGGCCACGTGAGCGCCACCGGCTCGCACGCCTCCGCCGTCAATCACCTCAGCGCCCACGCGGTCGCGCAGCAGCTCTCggtccagcagcagcagcagcaacaacaacagcagcagcagcagcagcaccagcccAACATACCTGTCGTGGGCGACGACCTCGAGATCAAGCCCGGCATCGCCGAGATGATCCGCGAGGAGGAAAGGGCCAAGCTGTTGGAGTCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCAGACAGCTATCAGTACCAACTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTACACAATCTTCGCTTTCGAGAACGTGGCCCCTTGAAATCCTGGCGTCCCGAGACGATGGCGGAAGCGATATTTAGCGTGCTCAAGGAGGGTCTGTCGCTGAGCCAAGCTGCAAGGAAATACGATATTCCCTACCCTACGTTTGTACTTTACGCGAACCGAGTTCACAATATGCTCGGGCCGAGCGCCGACGGTGGAGCTGATCTGCGGCCAAAGGGACGAGGGAGACCGCAGAGGATCCTGCTCGGTGTCTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTGGTCTTCCGCGACGGGCACTCGCCTCACATCGTCAAGGAAGAGCCAGCCACCATGTATCCCGCCTTGGCAAATTACGGCGCCTGCAACGGACCCGAGGGAGCAGTCAGCCCCAGTGCGGCTGCCGCCGCGGTCGCCGCCGTCGCTCAAGGTCTCAGACACCAGATGTGCAGTATGGTGGCAGCCGCGCACTCGCAGCAGCACGACATGCTCGCCACCAATCTCTCCACCAACCTCTCCTCCAGTCTCTCCTCCAATCTCCAGGCGGCCATGCAACAAGCCAgtcagcaacagcagcagcagcagcaacaacaacaacaacagcagcaacaacagcagcagcaacagcagcagcaccatcaccaccaccaacagcagcagcagtcgcatcatcatcaccaccaccaacagcagcagcagcaacaccaccatcaccatcagcagcagcagcagcaccaacAGCACCATCACCACCACCCGCACAGCAACAACAGCGGTGGTAGCGGCAGCGCGGCCGCGAGTCTGATACCGGGCTCCGGCACGCCCGGCAACAGTAACAACGGCAACTCTCCGCTCAATCTGGGCCTGGCGAGTCCCGGCTCGGCTGGACCGCCCGAGAGCCCGATGGAATCGCCGTTGGCCAGTCCACTGGGCTCTCTCATGGACCCGTCGCACCTGCCGCCAAGCGTCGAGGTCGGCATCGGCGTCAGCGGCATGACCTACAAGCCCGCGCGCAGCTTCGTCAGCCCCAGGCCCGAGAACCTCTTCCAGGAGGACATCTCCGACCTGGTCAAGAGTTCGCATGCCGCCCTCAAAGAGAAGGACAAGATCGCCGTCAAACTCGAGCCGCTGTCCGACTCGCGCTGTGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNSEHELASRAGLDDSLNLASAAAASSLQAQQQQQQRKKRRLASGDRSPSAGGLSPDARASDRDEQDSASTGHESHGLGSSSTPRSLGSPCSVMPSISVTPQINLQELPVSLPLPPPPPLPPPGGSSSQQQQQQQSAQQSPHPSLLGHHVSPGGHVSATGSHASAVNHLSAHAVAQQLSVQQQQQQQQQQQQQQHQPNIPVVGDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPATMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTNLSSSLSSNLQAAMQQASQQQQQQQQQQQQQQQQQQQQQQQHHHHHQQQQQSHHHHHHQQQQQQHHHHHQQQQQHQQHHHHHPHSNNSGGSGSAAASLIPGSGTPGNSNNGNSPLNLGLASPGSAGPPESPMESPLASPLGSLMDPSHLPPSVEVGIGVSGMTYKPARSFVSPRPENLFQEDISDLVKSSHAALKEKDKIAVKLEPLSDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305713;
- 90% Identity
- iTF_01037127;
- 80% Identity
- iTF_01037127;