Basic Information

Insect: Nasonia longicornis
Gene Symbol: stc
Assembly: GCA_000004795.1
Location: GL279054.1:101289-105974[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.6e+04 -4.3 1.6 15 19 501 505 500 505 0.81

2 16 0.14 1.1e+03 -0.4 0.1 4 10 534 540 533 541 0.94

3 16 4e-06 0.032 14.1 10.4 4 18 551 565 549 566 0.92

4 16 1.2 9.7e+03 -3.4 1.5 6 10 592 596 591 596 0.90

5 16 1.1e-06 0.0089 15.9 15.0 1 18 602 619 602 620 0.97

6 16 0.83 6.6e+03 -2.9 0.8 6 10 648 652 647 652 0.89

7 16 7.6e-10 6e-06 26.0 15.9 1 18 658 675 658 676 0.98

8 16 0.59 4.7e+03 -2.4 0.9 5 10 705 710 705 710 0.95

9 16 0.00023 1.8 8.5 12.4 4 18 723 737 716 738 0.86

10 16 1.5 1.2e+04 -3.8 2.0 5 10 767 772 767 772 0.93

11 16 0.022 1.7e+02 2.1 13.0 1 11 778 788 778 800 0.88

12 16 6.1e-10 4.8e-06 26.3 12.5 1 19 805 823 805 823 0.98

13 16 1.6 1.3e+04 -3.8 0.6 6 10 852 856 851 857 0.68

14 16 1.3 1e+04 -3.5 5.9 10 19 870 880 867 880 0.73

15 16 4.6e-07 0.0037 17.1 14.9 1 16 916 931 916 942 0.85

16 16 4.7e-06 0.037 13.9 13.0 1 19 948 967 948 967 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.6e+04	-4.3	1.6	15	19	501	505	500	505	0.81
2	16	0.14	1.1e+03	-0.4	0.1	4	10	534	540	533	541	0.94
3	16	4e-06	0.032	14.1	10.4	4	18	551	565	549	566	0.92
4	16	1.2	9.7e+03	-3.4	1.5	6	10	592	596	591	596	0.90
5	16	1.1e-06	0.0089	15.9	15.0	1	18	602	619	602	620	0.97
6	16	0.83	6.6e+03	-2.9	0.8	6	10	648	652	647	652	0.89
7	16	7.6e-10	6e-06	26.0	15.9	1	18	658	675	658	676	0.98
8	16	0.59	4.7e+03	-2.4	0.9	5	10	705	710	705	710	0.95
9	16	0.00023	1.8	8.5	12.4	4	18	723	737	716	738	0.86
10	16	1.5	1.2e+04	-3.8	2.0	5	10	767	772	767	772	0.93
11	16	0.022	1.7e+02	2.1	13.0	1	11	778	788	778	800	0.88
12	16	6.1e-10	4.8e-06	26.3	12.5	1	19	805	823	805	823	0.98
13	16	1.6	1.3e+04	-3.8	0.6	6	10	852	856	851	857	0.68
14	16	1.3	1e+04	-3.5	5.9	10	19	870	880	867	880	0.73
15	16	4.6e-07	0.0037	17.1	14.9	1	16	916	931	916	942	0.85
16	16	4.7e-06	0.037	13.9	13.0	1	19	948	967	948	967	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGTTCTTATGCAGAGCCAGATGGATCCAATTATTACGTTAACTCCAATAGTAACCAAGCACCAGGCAATCTTTCAACATGGGACTATTATCTTCCTAATACAAGCAACTCTTACGTACAAAACACACCAGCCCCATACACATTAAACTCTATGGTCTTCGAGCAGAGCACACCCAATTTGTACAATCATCTGCAGAGAAATACCATTCCACCATTGATGCCAAATGTTGTTCCCGCAAACAATGCATATCCAGTTAATGGAATTCAACAAACTGCTAATAATAAGgtCCATATGGCTCCTCCGGAAGGACATCTCAATACCATTAATAATCAGTTGCCATGTTTCTTTGAAGATAACAAGGTGCTAACCCAGCAAGCACCTCAAAAtcattattacaataatagaAGCAACAATTATCAAAACAGTGGCAAGCATAAAGACACAAGTAAAACCTATCCGGTAGCAAATATAGTTGAGCATTCAAATTTACACGCCACAGCTAATGAATTTGTGCCGAACCAAAACAAATGGGACCGTGGCACCTCTGCAAATCCAAACAAACATAGCAAAGGtcgaataaataatgattatcAAAATCAGAGTGGAGATCAAGCATCAAATAATGTCTACTTTGAAGATAATAAAGTTAGGTATAATGAtcgaaaatatgaaaataagaGGGATGTTGGCAGAAGGTGGAGGGATGATAACAGAGACATGCAAAGTAGCCAGCATAACCATAATCAGTATAATAAACAGGATAAAAAGGATTacggaaaaaatcaaaattctaGAAGATATCAGAATGATAGGTTTAGTCATAATAGAAACTTCCCCGAAAAATCGCATAATAATAAGCAAGAAAAAGATCACTCAGAAAATACTGTGTCCGAATCTAATGCAAATAGCAAATTAGAAAATCTAGCTGATCAAGATAATTCCAATAACACNNNNNNNNNNNNNNNATctgtagaaaaagaaaatacacaaTTGACAGGTTCTCAAATTACTAAAAATTCGAAACCATTCTCAAATAATAGTCGTGGAGATAGATATTACGATAGAAAAGAGAGATACAATCCTAGAGATCCTagagatagaaaaagtaaTTACCCCGAGAACAATGGATATAACAGAAGTAATTACAGCTGCAGAGATAGCAAATatgagaagagagaaaacagaaaTACTCTTACAGAATTTCGAGATACAACAAGTGATTGGAGACAGAGGACAAGTCAAATTGTGAATAAAAGTACTATACTCAAACGTtcttataacaaaaaatacgaGCCAGACGACGATGCAGATCAAAGAGAAAGATTAACGGAGCAACTGAATCGAGGCCAATTGGAATGTCTAGTTTGCTGCGAATCTATTCGCCAGGCCGATTACGTATGGTCATGCAAGAATTGTTACCACGTGTTGCACTTAAAATGTGTACAAAAATGGGCCATGTCGTCTCAAGACGAAAGTGGCTGGCGGTGTCCTGCCTGTCAAAACGTTACATTGGAGGTGCCGTCGGACTACTTTTGCTTCTGCGGCAAGACGAAAGTTCCGGAATGGAATCGTCGCGATATCGCTCATTCCTGTGGTGAGATCTGCGGCAGAACGCGTTCTGATATTAACTGTGTTCACAAATGTACGCTGCTCTGCCATCCTGGATCTTGTCCACTCTGCTTAGCCATGGTCAAAAAGACCTGTGGCTGCGGCCGGACGTCCCAGACGCAGAAGTGCAGCACAGGTCCATTGCTCCAATGTGAAGAGATTTGCGACCGTCCCCTTAACTGCTCTGTGCACAAATGCGAGTCGAAGTGCCATCACGGCAGCTGCGAACCTTGCgataaaattgttaaacaaGaatgtTTCTGTGGGAAAAACACTCGGGAAGAAACGTGTGTTTTGGACCTGCCGCCAATGTATTCATGTGAGAATGTTTGTAACAAAGTGCTAGATTGTGGTAACCATAAGTGTAAAGAAATTTGCCATCCGGGTCAATGTGGACCTTGTGTCTTAAAACCTGAAACTGTAAAACATTGTTGCTGTCGGCAGACTCTTTTAACTgataagagagaaagctgcttAGACCCAATTGCAACTTGTGATAAAGTGTGTTCCAAGCGATTGCGCTGCGGTCAGCCGaGTAATCCTCATACCTGCCAAGCAAACTGCCACAAAGACGATTGCCCTGAATGCGAGCTGATCACAAAAGTCAAATGCCGCTGCGGTTACATGGACAAAGAAATTCCTTGCAGAGAACTGACGACTAAGGCTGATGATGCtcgctgcgaaaaaaaatgtacaaagaAACGTTCCTGTGGCAAGCACAAATGCAACCAGAAGTGTTGTATCGATATTGAGCACATTTGTCCACTTCCGTGCTCAAAAACATTGAGTTGTGGTAGGCACAAATGTGAGCAAACATGTCATAGAGGTAGATGCCAGAACTGCTGGCGCAGCAGCTTCGACGAGCTGTACTGCGAATGCGGTGCTGCGGTCATCTATCCTCCAGTGGCCTGTGGCACGCGTCGACCCGCTTGTGACAAGCCCTGCTCTCGCGAGCATCCCTGCAGCCACGAAGTCCTGCACAACTGTCACAGTGATCCGACATGTCCACCATGCACTGTACTCACACAAAAGTGGTGCTACGGTGAACACGAACTGCGCAAGGCTGTGCCTTGCTACGTCAATGATGTTTCCTGTGGTCTACCTTGCAACAAGCCCATCTCATGTGGTAGGCACAAGTGCATACAGATGTGTCACTCTGGCCCTTGCGAGAAACCCGGACAGGTATGCACACAACCGTGTACTGTACCTAGGGAACTCTGTGGTCATATATGTGCCGCGCCTTGCCACGAGGGAAAATGCCCCGATGCGCCTTGCAAGGAGATGGTCAAGGTTACATGTCAATGTGGAAATAGGACAATGTCCCGCGTATGTGCGGAAAACTCTCGCGATTTTCAAAGAATCGCTAGTGGAATTTTAGCTAGTAAAATGGCAGATATGCAGCTTGGTCATTCAGTTGATCTTGAAGAAGTCTTCGGCCAGGGAGCTAGGAAGCAAAATCAACTGAAAACTCTCGATTGCAATGAAGATTGCAAAATGATCGAAAGAAATCGGAAGCTGACGCTTGGTCTTCAAATTGTGAACCCGGATCTGAGCGGAAAGCTAATGCCCAAATACAGCGAGCATATGAAAGAGTGGGGTAAAAAGGACCCCGTGTTTTGCCAGATGGTGCATGACAAGCTCACGGAACTAGTTCAACTGGCAAAAACTTCCAAACAGAAGTCTAGAAGCTATTCCTTTGAAAGCATGAATAGAGATAAGAGACAGTTTATACACGAATCATGTGAACATTTTGGTTGCGAGAGTCAGGCTTATGATCAGGAACCCAAGCGTAATGTCGTCGCAACCGCTGTTAAAGATAGGtGTTGGTTACCAAGTTACAGCCTCTCAGAGTTATTGCAAAGAGAAAACGGTCAACGGAAAGTACCAGGACCGATGGTTAACATCAACCAATTAAACAGATCAAAACTGAACAGCACTGACACAACTTATAGaAGCATGGATGTTGTGTTGAACTCGAAGAGAAGTTTAAAACCTCTACCTGCTGCTTCAGCTTCACCTCCAGCGGAATCTCCAGAACCAGAGATAGactattttaattacaatggTTGA
Protein Sequence: MATWDGSYAEPDGSNYYVNSNSNQAPGNLSTWDYYLPNTSNSYVQNTPAPYTLNSMVFEQSTPNLYNHLQRNTIPPLMPNVVPANNAYPVNGIQQTANNKVHMAPPEGHLNTINNQLPCFFEDNKVLTQQAPQNHYYNNRSNNYQNSGKHKDTSKTYPVANIVEHSNLHATANEFVPNQNKWDRGTSANPNKHSKGRINNDYQNQSGDQASNNVYFEDNKVRYNDRKYENKRDVGRRWRDDNRDMQSSQHNHNQYNKQDKKDYGKNQNSRRYQNDRFSHNRNFPEKSHNNKQEKDHSENTVSESNANSKLENLADQDNSNNTXXXXXSVEKENTQLTGSQITKNSKPFSNNSRGDRYYDRKERYNPRDPRDRKSNYPENNGYNRSNYSCRDSKYEKRENRNTLTEFRDTTSDWRQRTSQIVNKSTILKRSYNKKYEPDDDADQRERLTEQLNRGQLECLVCCESIRQADYVWSCKNCYHVLHLKCVQKWAMSSQDESGWRCPACQNVTLEVPSDYFCFCGKTKVPEWNRRDIAHSCGEICGRTRSDINCVHKCTLLCHPGSCPLCLAMVKKTCGCGRTSQTQKCSTGPLLQCEEICDRPLNCSVHKCESKCHHGSCEPCDKIVKQECFCGKNTREETCVLDLPPMYSCENVCNKVLDCGNHKCKEICHPGQCGPCVLKPETVKHCCCRQTLLTDKRESCLDPIATCDKVCSKRLRCGQPSNPHTCQANCHKDDCPECELITKVKCRCGYMDKEIPCRELTTKADDARCEKKCTKKRSCGKHKCNQKCCIDIEHICPLPCSKTLSCGRHKCEQTCHRGRCQNCWRSSFDELYCECGAAVIYPPVACGTRRPACDKPCSREHPCSHEVLHNCHSDPTCPPCTVLTQKWCYGEHELRKAVPCYVNDVSCGLPCNKPISCGRHKCIQMCHSGPCEKPGQVCTQPCTVPRELCGHICAAPCHEGKCPDAPCKEMVKVTCQCGNRTMSRVCAENSRDFQRIASGILASKMADMQLGHSVDLEEVFGQGARKQNQLKTLDCNEDCKMIERNRKLTLGLQIVNPDLSGKLMPKYSEHMKEWGKKDPVFCQMVHDKLTELVQLAKTSKQKSRSYSFESMNRDKRQFIHESCEHFGCESQAYDQEPKRNVVATAVKDRCWLPSYSLSELLQRENGQRKVPGPMVNINQLNRSKLNSTDTTYRSMDVVLNSKRSLKPLPAASASPPAESPEPEIDYFNYNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01190904;
90% Identity: iTF_01035897;
80% Identity: -