Basic Information

Insect: Nasonia longicornis
Gene Symbol: -
Assembly: GCA_000004795.1
Location: GL277964.1:125853-129160[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.22 14 6.2 1.1 1 20 447 466 447 469 0.88

2 9 5.4e-05 0.0035 17.5 4.4 1 23 504 526 504 526 0.98

3 9 0.014 0.93 9.9 0.6 1 23 532 554 532 554 0.98

4 9 4.9e-05 0.0031 17.7 0.4 2 23 561 582 560 582 0.97

5 9 1.3 83 3.8 0.9 1 23 588 611 588 611 0.90

6 9 2.4e-05 0.0016 18.6 2.0 1 23 615 637 615 637 0.97

7 9 0.0062 0.4 11.1 0.4 1 23 642 664 642 664 0.98

8 9 2.7e-07 1.8e-05 24.8 0.9 1 23 670 692 670 692 0.98

9 9 0.00011 0.0073 16.5 0.6 1 21 697 717 697 718 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.22	14	6.2	1.1	1	20	447	466	447	469	0.88
2	9	5.4e-05	0.0035	17.5	4.4	1	23	504	526	504	526	0.98
3	9	0.014	0.93	9.9	0.6	1	23	532	554	532	554	0.98
4	9	4.9e-05	0.0031	17.7	0.4	2	23	561	582	560	582	0.97
5	9	1.3	83	3.8	0.9	1	23	588	611	588	611	0.90
6	9	2.4e-05	0.0016	18.6	2.0	1	23	615	637	615	637	0.97
7	9	0.0062	0.4	11.1	0.4	1	23	642	664	642	664	0.98
8	9	2.7e-07	1.8e-05	24.8	0.9	1	23	670	692	670	692	0.98
9	9	0.00011	0.0073	16.5	0.6	1	21	697	717	697	718	0.94

Sequence Information

Coding Sequence: ATGATAAGTGAGatcGAGCCAAATGATGGACTACCTCAAATAATATGTTTGAAATGCTTGGGaacaatagaatttttatgtgattttCATAACATGTGCCATAATACTCAAAAGAATTTGGGATCTTCTGTAGAGggaTCAagcaataatgaaaaatctcaaGATAATCTTGAAAGTGATGGAGAGTCTAATAAAGAGAATGTTTTACCAATTAGTAATGAAAAACCCAAAGCCAAGTCATTGCAATCAGATCAAACAAAAGTCTCAAGTAACACTgcagaagatgaaaaaaatatgccTCCACAAGAAAAAGAGGTTGGAAATGATAAAATAGCTAACATACCAAATGAAATCCAAGATTTGGATGCCACTAACTGTAAAAAATCTAGCAatcaaatttctaaaaaagaaaaagcatcTGATAAACCCGTTCCAAATGATGAAAATTCGCAAACCGACCAANNNNNNNNNNNNNNTTCAGTAAAGGATgcagtattaaaaaatcaagttcaACGATCTCGATCAACCAGATCTGAaaagaatgataaaaaaattaatagaagaTCTaaagcatcatcatcagtTGTAAatacagtgaaaaaaaacgatagTAAGCAATCAAAAAAAAcgattgataaatattttgaaacacCAGCTCAATGTCAGAATAAAAGTACAAATGTTGAAAATGTTAATCCTAATCAGACACAAGTTGTTACTACTAAAAACTCTGATGAAGATGCAGaacaaaataatgttatatttgAAGGAACCATAATTAATTCTCCAGGTGATACTTCCATTATAATGCCTCTAAAAACGGGATCGTTCAATAATCAATTACGACTTGAGGATGTTGAAATGGCAGATGGCAGTGAAATCGTTCAAGCTCAAGAAATAGTTTGGATATCTAGCAACTCTCAACAATTGCCTGAGCCTGAAAAACCAAAAACAATGAACGCAAACCAATCCAAGACTACTAGTCCTGCTCCAGGAGATGAAGCTGAGATTATGAAAATGGATGGAACCTTAATAGTACAAACGTCAGGGCAAGATATGAATTTAACTACCTCTACTGAAAAAGTAATTGTGCTTGAAGTGCAATTACCCGCCAAAGAAAACTCAGTTGCTTTACCAAAATCTACTGAAGTTCTCAAGAGAAATCGCTCTATATCAAATGTTAGTTCGCGTCTCTCTAGTGGAGGGAAATCTGCCAAGATATCCGAGTTAATGACTGATCAACAAAAAAAGGACATTGAAACACTTTATTCAATTGACATGACTCGAGTTGACGAAacaaaagttaatgaaaatgTCAATACCCTTgataaatgcaaattcgagTGCAAACTTTGTGATACTGTTTATCCACGTCTTGACAAATGCCaagtTCACATATGGCGACACTTGGATATGAAACCATACTTATGTAAAGCATGTGAATTCTCAACATTAACAGTCAGCAATATTCGTTGTCATATCAGAAAAAGTCACTTGAAAATTAAACCGTTTGAGTGTCATATATGtaataaatgttataattCAACTACATTACTTGAAGAACACCTTAATACGCATACAGGTGCAAGACCTTATCAATGTGATTTTTGCGAATTTGCAAGCTCGAGTAAGCAAGTTCTTGCACATCACATACTAAttcacaaaaaagaaaagGATATTAAATGTGACATATGTGGTAAAGGATTTTATTCGAAAGGAAGGATGAAGGCTCACAGAATCACTCATAATAAGGAACAGGCATTCAAGTGCAAACTCTGTTCAACCTATGTTTTACACGAAGACGCCCTTGAACGACATTATGCGAACGTTCATACCAAAGATTATGTGTGTAAAATTTGCAACAAGGTTTACAAATCAAAGAAAGCTCTGCATAATCACGAAAGTGTCCATTCTGAAGCAAAATTTGTATGCCCCATTTGCCCCAATGTATATAAAAGCACCCACATATTGAAAGAACATATTTTGAAACATCAAGGAATTAGACAATACAAGTGCAATAGTTGTAGCAAGTCCTTTGCTCAGCAGTCACATCTTGCAGCACATATGGCTGTTCATAGTAACATAACaTACAATTGCCCTGGGTGTCAAAAAGGATTCAATCGACATGACAATATGAAAGTTCACGCTAAACGTTGTGAGAAATTCTTGGCAAACCCTGCACTACAAAGTTTACTAACAAAACGGAAGataagtttttcaaaaaataatacagcTAAAGTAAGTATACAAAACGAAAACCATAATAATTCTGCACCAAAACAAAATCGTCAAACCTCGAATAATGATTCCGCTAAGTCTGTACCTCAAGAGCCAGCGAAAGATCTACAATCAAATGATAACAGTACAACTACAGTTGAAAACATATTATCATCGAAAGAATTTTGA
Protein Sequence: MISEIEPNDGLPQIICLKCLGTIEFLCDFHNMCHNTQKNLGSSVEGSSNNEKSQDNLESDGESNKENVLPISNEKPKAKSLQSDQTKVSSNTAEDEKNMPPQEKEVGNDKIANIPNEIQDLDATNCKKSSNQISKKEKASDKPVPNDENSQTDQXXXXXSVKDAVLKNQVQRSRSTRSEKNDKKINRRSKASSSVVNTVKKNDSKQSKKTIDKYFETPAQCQNKSTNVENVNPNQTQVVTTKNSDEDAEQNNVIFEGTIINSPGDTSIIMPLKTGSFNNQLRLEDVEMADGSEIVQAQEIVWISSNSQQLPEPEKPKTMNANQSKTTSPAPGDEAEIMKMDGTLIVQTSGQDMNLTTSTEKVIVLEVQLPAKENSVALPKSTEVLKRNRSISNVSSRLSSGGKSAKISELMTDQQKKDIETLYSIDMTRVDETKVNENVNTLDKCKFECKLCDTVYPRLDKCQVHIWRHLDMKPYLCKACEFSTLTVSNIRCHIRKSHLKIKPFECHICNKCYNSTTLLEEHLNTHTGARPYQCDFCEFASSSKQVLAHHILIHKKEKDIKCDICGKGFYSKGRMKAHRITHNKEQAFKCKLCSTYVLHEDALERHYANVHTKDYVCKICNKVYKSKKALHNHESVHSEAKFVCPICPNVYKSTHILKEHILKHQGIRQYKCNSCSKSFAQQSHLAAHMAVHSNITYNCPGCQKGFNRHDNMKVHAKRCEKFLANPALQSLLTKRKISFSKNNTAKVSIQNENHNNSAPKQNRQTSNNDSAKSVPQEPAKDLQSNDNSTTTVENILSSKEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01274798;
90% Identity: iTF_01037311;
80% Identity: -