Basic Information

Gene Symbol
-
Assembly
GCA_000004795.1
Location
GL277983.1:1018317-1023778[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-08 2e-05 24.4 0.1 3 43 1385 1427 1383 1430 0.88

Sequence Information

Coding Sequence
ATGGACGAGTCAGCAGAAAAGAGCAGTGTCTCTTTTTCCTTTAGCCTGGATTTAGATTCCGTAGTCAGCGATGCTTCATTAGATTCGGATGCAACTGATGATGGGCTTCAAATTGATGTTGCAGAAGTGGATGATTTCAATAATGATAATACAACTAAATTAAGAAGACAAGTGACTGTTGATGAAACATCTTTTTTGAATGAAATGGAAGAGGAGATTGAACGGCAATTGGATGCAAAGGCAGCTAAATCTAACTTGACTGCTacgaatgtaaaaaatattttgaaacatgTTATATCACATGAACATGTTAGAGCAATGGTCAATAAAAGACTAACAAAAGGAGATGATGATATTGTTTTTGAACCTAAATTAACAAGAGCTAAAGCCAAAGAACTAGCTTTGGCTCAACCTGATATCCCTTGGCCTATGACACCAGTAAAAACCACAACTTCTGAGGTTCAAGTGCTTATACAAGAAGAATTTCCTGAAGATTCCTCTGATGAAGAATATCAACCTGACCAAGATCCACCAAGCGATGACGATAAAGATGTGGATAATTCTGTAGGAAGCGATATGGATTCTCAGCCAAGAACACCTGCAACTCCCTGTGAGTTATCTGCTTCAATGGAGAGAGCAATCACACCTGATGTCCAATATGATCAAGAAGGAGTTTTTAAAGTACCACAAAATATTCCACATGTTCCAACTGAAGAGGAAAGTATAGGCCACAGAACTCGATCAAAACTGTGTCTTAGTGAAACACCTTTAGAACAAATAGAACAAGCATTTATCCCACCAGATATCACAACAGACATGTATGACTGGGACTGGGAACCAGAAGATGAGTATATCAACTTTTTGAAGGAATTGTATACTCAGCCTATTCCAAAAGAAATAAACATTGATGATGATCCTGAAGCAGATCCAGAGTATAATATTCTGGAGGATGAAGACGTAGAATTAcTggataaagaagaagaactcAGAGAAGACAAAGCAGTCAAAATAACCAAGAAAGAATTGAAGACTTTGATAGCAGAACTTGATGAATTTGCAGACCAGTTTGCAAAACAACATGAGCAAGaacaacaacgacaacaactattacaacaacagcaacagcagcagcaacaacataaaatatcgaaaaagaaaagaactcCCGATTCTTCGTTTGTATCAATGGAGACTTCTTTTCCTGGAAATCCAATGGTGGAATTATTGCCTGTGTTAGCTGAACCAGAACTTCCAGAAATTGTTAATCCACACCAACGCTATTTAATATCAGTTCAGCTTTCTCAACATGTGCAACTAATGGCCCAACAATTTATAATGACTTATAAACATCCAATGCTGCACAAACATTCACAAATTTGTAAAGACAATTTAGGCAGTTTACGTACTTTAGGTGCACATATTGGTTCAGAATTTATAGCTCAGAATCTCGCAGATGCATTACAGTTAGTTTCTGATTGGGAATTAAGATTCACTGATGAGACATTTTCTGAGGAATATGCTGAATTTCTAGATGCAGAAAtcgaacaagaaaaaatcttttttaagacaaaaagaaaatataaaaaccagTTCCACCCTGAATTAATTAAGTTAATGGTTGATAGTAAAGCACTTATGCATCCCCAATTGCTTCCAATCATTTTCCCTAATTCTACTTCAATACACGATAAGCTCAAATATTTGTCATCAGAAGAACATCTTATAGCTATTGGATTAGAACAGTTCATACCATACATCAAGTCATTGAACAAGCGATTTAATAAAGACTGCCATATATTTGCCGATGCTgtaaaagaaatacaaaaatatttgctacCAACAAAAGATGTGAAAGGAATGATAATGCACATAAAAAGACGTAAAATAGCTAAGATAAACAACCCCATTAAGcATTATTATGTAACTGGCTCAGCTCCAAGAACAGAACACtgtgttttaaataaatacgacCTTAGAGCACCAATAGATCAacctataatttttttacctcCATTTTGGAAAGATATAATTGACAATATACGGTATGGCACACTCGAGGAGTTCTTATGTTTCACGAAGTCAAAAAAGATAGACTATGACGACGAATTTTTTCCAGTATCCCACAATGAGATCATGATACATAAAGATCATGAATTGAGAAATCCGATTGTTAACGTGATGAGAAATATGCCTTCGTTAATGACACCCCAAAAAGCAGATACTAGCACATCGTCTTCAAAAAGTGGCAGATCTGCGAGTAGTTCAAAGCCCAAAATAACGCAGTCGAGGGTAAACGAAGCTGAATCCGATGCAGAGTCTGCAGAGAGTATGAGGACATGCGAAACGGACGAAGAGGAGTCGAGGACAACTCGATTAAGGATGACTACACCTCGTCTGGCAAAAATCAAGAGTGCTCAAAATATGAAACTTATGGCCCAGAATTTATCACCAAAGGTTACCACGTCGAATACTAATACCATCAATGAGAACAAAGACTACTCCGATAAGAATGACGACGACGCATCTTCGTTTAGCAAAGGGGATAATGAAGACGAAATAGCTGAACTTATGCTTGCTAGCACAACCATAAAGAAGAATACTGCAAGTCGAAAGAAGACAAAGCAAGCTAGAgagttggaaaatttaaaacgaTTGTTAGAgactgaaaataatattaatgaatGCGATAGAGCTACGAaatttgCTGCTTCATATATTCAAAAGATTAGCATGAAAGTGGAATCGAAAGACCCAGAGCTATATAGGGCTGTATTCAAGTTATTTTTGGACTACAGTGAAAAGATAGAAAATCTTGATCAGAATAATGGCAGCGATTATTTTCCGGATGAAAATGCATCTCTTCCTGGTggtaaaaatttacaagtCACAGAAAGAAAGGATATTGATAGAGATAAACTTACAGTGGAACTTTATAAAGAAGTCAATGAAAAACTCCAGGAATATCCGGATCTGCTcacagattttttattatttttgacaCCTCATCAGGCGGCACTAGTAGACAAATCCGTAGAACACACACACTTGCTGAAAATGCGCGAATTTGTTCAAGTAACCGAAATGTATTTCGCAAAACAACCTTCTCGTATAGGAAAAGTTATGCAAGCAATGACACAAATATCCTCGGATCCGTTTGTAACGATCGAGACGGCACAAGCTGTAATGGGCGCAGCTCTTAAAGGACATCCATTAATTATGGATCTGTTTTTGCAAATTCTTCCTACAGGGAAACCTCCTGAAAGCTTGTTTGCTGCTCACATGTTCGAGAATCTTTTGTGTCCAGTTGGGCCACATGACAAAAACAAGGCCTACGATGCGGATGCTCCggaattttatgaaaacatTGAGCTACCAGTGTCTACTCCTCAAGAAGACCCTTACGGAGGCGATAGTTGCAAGTGTGATTGTCACAATTTTGTTGATTCGAAAGCCAAAGGAACCAACGAACATTGCGCGTCTTGTGGGACAAGGtttttgaacGGAAGGATATATCTACAAACTTCCGAAGGTTTGAGGCCAGCGAAAATTACGTTCCCTGGAGCAGACgatgaaaagctcgagaaCATTTCGCGAGTATCTTTAAAAACAACTGAAAGATTTGTTCCATGCCCACCGCCGAGAAAGCGTCGGAAATCTTCTAAGAGAGATTCATTATCTGAGGAATCCAACGTTAAACCTTGTTCATCCAAAGGATCGCCTACGAAAGATAGTTTGGAAGAAAGCGATAAACCGTCGACAAAGTCTAATAAAAAGGGCATGAAATCGCCATCTAAATCTATAGATTCTAAGAAATTAGTCAAATCTGCTTCTGTAAAAAGtaaacgagagaaaaggatTGATAAAAAAGATGTCAAATTTGAGCCAAAGACTGATGACGATCAAAACGAATTTGGTCCTAATACTGATAATACGGAATTTGAGGAAAGTATAGGCTGTAATACTACTAATGATGAATATGTGGATTTGTttGGTAGTAAACTTGGTGAAATAAGTACCGATAGTCATGAAGACGATGCATTGACAAGCCcggaaaaattaaacgtttcTTTCACAAATGTGGAAAAGTTAGATAATTCTAGTGATTCTGATAGCAGTACAAATTTGGAAACTGAGCTGTCAGCTATTGATACGCCTTGGACAATGCAAGAAGATAAAATACTCTTAGAGAATGTACAGAAAGAATACTcggaaaaaacttttaacttAATTAGTGCatcattgaaaaatagatCTGTTCATCAGgTGAAGGAACGATGTGAATATTTACTGTCTCTGATAGAAAAAATGGCATAA
Protein Sequence
MDESAEKSSVSFSFSLDLDSVVSDASLDSDATDDGLQIDVAEVDDFNNDNTTKLRRQVTVDETSFLNEMEEEIERQLDAKAAKSNLTATNVKNILKHVISHEHVRAMVNKRLTKGDDDIVFEPKLTRAKAKELALAQPDIPWPMTPVKTTTSEVQVLIQEEFPEDSSDEEYQPDQDPPSDDDKDVDNSVGSDMDSQPRTPATPCELSASMERAITPDVQYDQEGVFKVPQNIPHVPTEEESIGHRTRSKLCLSETPLEQIEQAFIPPDITTDMYDWDWEPEDEYINFLKELYTQPIPKEINIDDDPEADPEYNILEDEDVELLDKEEELREDKAVKITKKELKTLIAELDEFADQFAKQHEQEQQRQQLLQQQQQQQQQHKISKKKRTPDSSFVSMETSFPGNPMVELLPVLAEPELPEIVNPHQRYLISVQLSQHVQLMAQQFIMTYKHPMLHKHSQICKDNLGSLRTLGAHIGSEFIAQNLADALQLVSDWELRFTDETFSEEYAEFLDAEIEQEKIFFKTKRKYKNQFHPELIKLMVDSKALMHPQLLPIIFPNSTSIHDKLKYLSSEEHLIAIGLEQFIPYIKSLNKRFNKDCHIFADAVKEIQKYLLPTKDVKGMIMHIKRRKIAKINNPIKHYYVTGSAPRTEHCVLNKYDLRAPIDQPIIFLPPFWKDIIDNIRYGTLEEFLCFTKSKKIDYDDEFFPVSHNEIMIHKDHELRNPIVNVMRNMPSLMTPQKADTSTSSSKSGRSASSSKPKITQSRVNEAESDAESAESMRTCETDEEESRTTRLRMTTPRLAKIKSAQNMKLMAQNLSPKVTTSNTNTINENKDYSDKNDDDASSFSKGDNEDEIAELMLASTTIKKNTASRKKTKQARELENLKRLLETENNINECDRATKFAASYIQKISMKVESKDPELYRAVFKLFLDYSEKIENLDQNNGSDYFPDENASLPGGKNLQVTERKDIDRDKLTVELYKEVNEKLQEYPDLLTDFLLFLTPHQAALVDKSVEHTHLLKMREFVQVTEMYFAKQPSRIGKVMQAMTQISSDPFVTIETAQAVMGAALKGHPLIMDLFLQILPTGKPPESLFAAHMFENLLCPVGPHDKNKAYDADAPEFYENIELPVSTPQEDPYGGDSCKCDCHNFVDSKAKGTNEHCASCGTRFLNGRIYLQTSEGLRPAKITFPGADDEKLENISRVSLKTTERFVPCPPPRKRRKSSKRDSLSEESNVKPCSSKGSPTKDSLEESDKPSTKSNKKGMKSPSKSIDSKKLVKSASVKSKREKRIDKKDVKFEPKTDDDQNEFGPNTDNTEFEESIGCNTTNDEYVDLFGSKLGEISTDSHEDDALTSPEKLNVSFTNVEKLDNSSDSDSSTNLETELSAIDTPWTMQEDKILLENVQKEYSEKTFNLISASLKNRSVHQVKERCEYLLSLIEKMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01274417;
90% Identity
iTF_01036957;
80% Identity
-