Nlon011284.1
Basic Information
- Insect
- Nasonia longicornis
- Gene Symbol
- retn
- Assembly
- GCA_000004795.1
- Location
- GL278043.1:286241-288927[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 2.9e-16 59.4 0.0 17 89 21 91 11 91 0.94 2 2 5.6 1.5e+04 -3.7 0.0 75 87 263 275 258 275 0.76
Sequence Information
- Coding Sequence
- ATGCAGCGTTTTGTTTCCTATACCAATTACCCCGTCCTACATTGTGCGGCTCCACCCatgaGAACGCCGATCAACCGACTGCCCATCATGGCCAAGTCCGTGCTGGACCTCTACGAGCTGTACAACCTGgtgatcgcgcgcggcggcctcGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGTCTCCACCTTCCGTCGAGCATAACCTCGGCCGCGTTCACGCTGCGCACCCAATACATGAAGTACCTCTACCCGTACGAGTGCGAGAAGAAGCACCNNNNNNNNNNNNNNGAGCTGCAGGCGGCGATCGACCGCAACCGGCGCGAGGGCCGGCGTAGCAACTACGGGGCGTACGGGGGCGGCGGCGAGgccggccagcagcagctgatgcACCACCAGCGCAGCCCGCACGCGCCCTCCTCCCTGGCCTCGCTGCACCAGCAGATCTCGCCGCTCTCGCTGGTCTCGGCGGCCGTGCAGCaggccgcggcggcgagcggCCAGCACCAGGTCGGCCCGCAGAACCCGGTGAACGGCAGCGCGGCGCACACGCCCCTGCTGCACCACCCGCACCACCCCCAGCACAGCCAAACGCCCGTCGCGGGCATGGCGCCCGAGTTCGAGGCGCACATGGCCGAGTACGTCAAGCGGCTGCAGCACGAGATGCGGGTGCGCAGGACCTCGCCGAACCGGCTGATCCACCGGCAGGGCAGCGCCTCGCCGCCCCCGGCCAGGTCGCCCTCGCGCGACGCCGCCATCCTCGAGATGTCGCGCTTCACCCTCTGGAACATGTACAACAACAACCTGCACCCGGGCATCGGCTACCCGCCCTCGGCCGTCTCGCCGCAGAACAGCTCGCACTCGCCCCCGCCGCAGCCCGGCAGCCCCGAGCCCCAGAAGGAGGCGCTCGACCTGGGCCTCAGGTCCTCGCCGGGCTCCTCCTCGCCGGCGCGACAGAGCCCGCCATCGTCCGGCGGCAGCATCGCCATcaagcgcgagctcgagctcaCTAGCAGCGGCACCTCCGCCAGCAAGAGGCTCTGCATGGACGAGGACGGGCCCGCGGAGAGCGCTCTTCCCGCCCTCCCCGGCACGCACATCAAGATCTCAAACCGAGGGGACGGCCGCGACAACTCGCTCGTCGTCAGCATGGAGCTCAACGGCGTCATGTACCAGGGCGTCCTCTTCGCCCAGACCGACGGCCGGGCCAGCGTCAGCGCCTCGACCAACAACAACGAGACCATGGCCTCGACGCGCAACGTCGTCTCGTGA
- Protein Sequence
- MQRFVSYTNYPVLHCAAPPMRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHXXXXXELQAAIDRNRREGRRSNYGAYGGGGEAGQQQLMHHQRSPHAPSSLASLHQQISPLSLVSAAVQQAAAASGQHQVGPQNPVNGSAAHTPLLHHPHHPQHSQTPVAGMAPEFEAHMAEYVKRLQHEMRVRRTSPNRLIHRQGSASPPPARSPSRDAAILEMSRFTLWNMYNNNLHPGIGYPPSAVSPQNSSHSPPPQPGSPEPQKEALDLGLRSSPGSSSPARQSPPSSGGSIAIKRELELTSSGTSASKRLCMDEDGPAESALPALPGTHIKISNRGDGRDNSLVVSMELNGVMYQGVLFAQTDGRASVSASTNNNETMASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079598;
- 90% Identity
- iTF_01274262;
- 80% Identity
- -