Ngir000984.1
Basic Information
- Insect
- Nasonia giraulti
- Gene Symbol
- GATA6
- Assembly
- GCA_000004775.1
- Location
- GL274178.1:6423063-6431638[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-12 5.5e-09 35.2 7.6 1 34 518 549 518 550 0.94 2 2 2.6e-19 7.5e-16 57.1 6.1 1 35 578 611 578 612 0.98
Sequence Information
- Coding Sequence
- ATGAGGCTGACACCGATCGagTTTTTCCAATTCCAGGATACGATGAAGGAAAACCTGCAGAAGCAAGACGTGAAGCTCGAGTGGGAGAACCATCAGCAGGAGGAAGGCTCGCCCCATCAGGAGCCGCAGCAGCAATCGCCCGTGGAAAGTCCGCGAAGTGTGATAACCAGCCGTCGGCACGTGCGAACCATCACCGCGACTGGTATAATCGAGACTCGCGTCGAATCCGCGCCGAATTCACCCGAGAATGGACAAACTGACCTGCAGCNgcagcagcagcagcacattgtccaacagcagcagcagcagtcgaggtCCATAAAACAGGAGAACCAGGAGCCACCGCCGCCGTACACGGAGGAGccacatcagcagcagcagcagtaccacATACAGATGTCCCATGAACACAGTCCCGACGACCAGCAGAGAGTCGTCGAgcagaagcaacagcagcacgtGATCTACGCGACGAGTAATGGACAGGAGATGCAGGTCGACGGGGCCGAGACTACCGAGGGGACCATCACTTTGAACGTTGAGGAGAGGACTAGGTACGAGACGCCAGCGCCGGACCGCGTAGAGGTCGACGGCGTGACGTACGTGGCCTACAGCGAGAGTCAGCTTCGAGCCCGAGACGCTCACGTCATCGCTGTCCAagagcaccagcagcagcagcagcaacaacgcCAGTCAGTTCCCCCTCAACGTTACAGTCCCCACGACCAGGTCCCACAAGACctacagcaacagcagcagcgttacCAGACCTCACCCGTTGCTTCGGAGACCTACGAGGCCCAATCCTTGGTCTCCCAGACACCCGGCAACCAACAGCTCAGCTCTCCAGGTCAGAACTACTCTCCGCCGCTCGACGTCATCAGGTcaggacagcagcagcagcagcaacacctGGTAGCCTATACCGATGGTGCCAGCATCAAGTACAGCGCCGAGGTCAGCGTCGCCGCGGAGAACCTCAAGCAGTCCAGTACGTACACCACTCTGGAGACGGTTCCTCTAGCGCCGACCCCAGCGGTACCTTACACCACCCAGTACATCGCCACCGAGGCGTTCCAGCAGGTGCCGACGAGTTACGGCTACCACAAGCACCCGGAGATCGTTCTTTGCCCTATATCTAGTCAAGCGAGAGGCGGCGAGATCGACCACGCGACGAACGTGTACATAAAATCGGATCCGACCCTCACCTCCTCGTCGCTTATGCGCACGTCTTTCCAATACGAGCAGCCGTCCTCGCCGTCACAGATGAACGGCTATCCCGGCGGTTGTCAGTTCATCAAGCCGACGAACGACCAGTACTGGGCCCAGTCAACGGGCCCCTCACCTCCGCCAGGATTCGACTACGCGCAGGGCTACGGAGCGGTACCGATCTCGGCCGCGGCCGTGGCCGCTGCTACCGATCCCAACAGCATCATGTTCTCCGGTGGCTCTTACGTCACCAATGGGCCCACCTCGCCCTGGACGCCCAATCCGATTCTGACCAGTGCCGAGGACACCTTCGACGGTCCCGGCGCGGAAATCGGCAGGGAGTGCGTCAACTGCGGAGCTCATACGACTCCACTGTGGAGGAGGGACGGCACCACTTACTTGTGCAACGCCTGCGGAATCTGCAGCAAGACAAACGGCATCAGTAGGCCGCCCACGCAGAGGGCCAAACCCAAGACGTCCGTACCACCGGTGAGTACTGGCGGCAGAAGACTAGGCGTGAGGTGCGCGAACTGCAGtaccacgacgacgacgctctgGCGGAGGAACAACAACGGCGAGCCGGTCTGCAACGCCTGCGGGCTCTACTTCAAACTTCACGGCGTGAACCGACCGATGAGCATGAAAAAGGACGGCATCCAGACGAGGAAAAGGAAGCCGAAGAATCACACGAACGTGAACAACAATCACGGAGTGTCGAACGCCATCCACAAGCCCGAGATCAAGTCCAGCCTACTCGCGTGCCACCGTTAG
- Protein Sequence
- MRLTPIEFFQFQDTMKENLQKQDVKLEWENHQQEEGSPHQEPQQQSPVESPRSVITSRRHVRTITATGIIETRVESAPNSPENGQTDLQXQQQQHIVQQQQQQSRSIKQENQEPPPPYTEEPHQQQQQYHIQMSHEHSPDDQQRVVEQKQQQHVIYATSNGQEMQVDGAETTEGTITLNVEERTRYETPAPDRVEVDGVTYVAYSESQLRARDAHVIAVQEHQQQQQQQRQSVPPQRYSPHDQVPQDLQQQQQRYQTSPVASETYEAQSLVSQTPGNQQLSSPGQNYSPPLDVIRSGQQQQQQHLVAYTDGASIKYSAEVSVAAENLKQSSTYTTLETVPLAPTPAVPYTTQYIATEAFQQVPTSYGYHKHPEIVLCPISSQARGGEIDHATNVYIKSDPTLTSSSLMRTSFQYEQPSSPSQMNGYPGGCQFIKPTNDQYWAQSTGPSPPPGFDYAQGYGAVPISAAAVAAATDPNSIMFSGGSYVTNGPTSPWTPNPILTSAEDTFDGPGAEIGRECVNCGAHTTPLWRRDGTTYLCNACGICSKTNGISRPPTQRAKPKTSVPPVSTGGRRLGVRCANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHTNVNNNHGVSNAIHKPEIKSSLLACHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00144252;
- 90% Identity
- iTF_01036705;
- 80% Identity
- -