Basic Information

Insect: Nasonia giraulti
Gene Symbol: -
Assembly: GCA_000004775.1
Location: GL274995.1:140191-150192[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00023 0.016 15.4 4.0 1 23 231 253 231 253 0.98

2 9 0.021 1.4 9.2 11.8 1 23 259 281 259 281 0.95

3 9 8.4e-05 0.0056 16.8 6.8 1 23 287 309 287 309 0.99

4 9 3.7e-05 0.0024 17.9 1.0 1 23 315 337 315 337 0.95

5 9 2.4 1.6e+02 2.8 0.5 12 23 368 379 363 379 0.84

6 9 3.4e-06 0.00022 21.2 0.0 1 23 385 407 385 407 0.96

7 9 0.00058 0.039 14.1 0.4 1 23 419 441 419 441 0.98

8 9 1.5e-06 0.0001 22.3 2.0 1 23 508 530 508 530 0.97

9 9 4.2e-05 0.0028 17.7 4.6 1 23 540 562 540 562 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00023	0.016	15.4	4.0	1	23	231	253	231	253	0.98
2	9	0.021	1.4	9.2	11.8	1	23	259	281	259	281	0.95
3	9	8.4e-05	0.0056	16.8	6.8	1	23	287	309	287	309	0.99
4	9	3.7e-05	0.0024	17.9	1.0	1	23	315	337	315	337	0.95
5	9	2.4	1.6e+02	2.8	0.5	12	23	368	379	363	379	0.84
6	9	3.4e-06	0.00022	21.2	0.0	1	23	385	407	385	407	0.96
7	9	0.00058	0.039	14.1	0.4	1	23	419	441	419	441	0.98
8	9	1.5e-06	0.0001	22.3	2.0	1	23	508	530	508	530	0.97
9	9	4.2e-05	0.0028	17.7	4.6	1	23	540	562	540	562	0.96

Sequence Information

Coding Sequence: ATGTGCACCACACCTGGGAACACCGGTCCTGGGTTTGGCTATGCCACATGGTCATTTAGCGGACCCGGAAACGACAGCCGGGAGAACACACAAAGCGACATCTCCGGTACCATCAGCTATGCAGCGGTCAACAACAACCAGGACCAGGCCTCCAGTCCCAAGATACAGATTGATGTCAAGCCAGCCAAGATACAGAACAGTGCGCACCGAAGGACCATGTTCACGATGAACGAGAGCTGCCAGCAGACACCAGCCACAGCACACCACGGACACAGCACAGGAGCCCATAATCAAACCAGCCACTCTACTCACGTCAGGTCCAAGAAGCACCACGACGTCTTTGCCTTGACCTGCGACAAGGGAGGATGCAACTGTGATGCCCATCACTCTACACCAACACCGTCCCTCTTTCCCAACACTCTGGTCTTTGCCACGGACAAGCACACCATGAGCAAACACTTCATGACTCCCATTGGTCCTCTCCAACTCACAGCTGAAGAATGCAACGAAATCCTGATGAAGCGAGCAGCTGCTGCCTCCAACCAGTCCAACAATGTTGCCTCCAGTCAGACTGAAGCCGCAGCTCACTTTGGCCATGTTCTCACTCATGTAAATACAAGCCAGATAGATACCAAACCCAAGCCTCAGCAAGACATAGGATCGCAAGTGAGGGTACCCAAGGAGAGGCCCTACTCTTGCACAGAGTGTGGAAAGTCGTTCCTCCTGAAACACCACCTGACGACCCACGCGAGAGTTCACACGGGCGAGCGGCCCCACATCTGCGTGCACTGCGGCAAGAGTTTCGCGCACAAACACTGTCTCCATACCCATCTCCTGCTGCACAGCGCCGAGAGACCGTTCCAGTGCCGCGAATGTAAAAAGTCCTTCACGTTAAAGCACCACCTGGTCACCCACACGCGGGTGCACACCAGGGAGCGGCCGTTCGTTTGTCCAGAGTGCGGCAAAGCCTTTCCCCTGAAACGTCACCTGGTGACGCATAGCAAGTTCCACACGGGAGAGCGGCCATTCGTCTGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAGTTCCTGCAAAAGAGGACCCTGCTGGCGCACATGCGGCTTCACACCGGGGAGACGCCGTTCGCCTGTACCGTTTGCGGAGAGGCCTTCCCCAGGAAGTCTGACCTCATAGCTCACTCCAAGATTCACAATAGCAGTAATTCTGATTCGGATACAAAACCGTTCACGTGTCGGGAATGCGGATTGGAGTTTAATAACAGGGAAGCCCAGACTTTGCATTTAAGGTTACATTCTGCTGACAGAACGCTTGTAACTGACCTTTGCGGACTTGCTGCTACATTTCAACAAACCACGGGACACTTTCTTACAGCCAACACTTCCAGTTCTCACCAGATGAACGGACCACTAGGCTCGTCAAGCGCCGTAAGTCACATGCACGGCGCGACCCAGACTTCGCCGCCAGTGGGTTCGGGTCCAAAGCCCAAGCCGCACATCTGCCCGGACTGTGGACGAGGTTTTGCCCAGAAGCACGGCCTGTCTCAGCATCAACGTCGACACACGGATGGTAGTTGTCACATAAGGTCGCACATCTGCGACAAGTGTGGTAAAGCCTTCTTCCAGAAGAACCACCTGCTGCTTCACCAACGTCAGCACATGGACCCACCACCGAGCATAGTGCGCCAGCAGCAGAGGCAAGCAGCACAGGCAGCTGCGCAAGCAGCCCAACAAGCAGCAAGCGGTGGAGGTACTGTCATCACCGTCGATGGGACGCAAACCTGCGTCGATACGAAAGCCATTGCCCTTCAGGCGATACAGCAAGTACAGCAGcaagtgcagcagcaacaacaggcGGCCCAACAGGCTGCCCAGCAACAagccgctgcggctgctgctgcagctcagcaggcgcagcagcagcaacaacaacagcaagcctcgcagcaacagcagcaacaagccgcgcagcagcaacaggcagcaacagcagcaagcagcgcagcagcagcaggcagcTGCCCAACAACAAGCGGCGCAGCAACAAGCTGCTGCggcacaacagcagcagcaacaacaacaacaacaacagcaagcAGCTCAACAGCAAGctcagcaacaacagcagcaggcacaacagcagcagcagcagcaaccgtGTTCCGTGGATACTAA
Protein Sequence: MCTTPGNTGPGFGYATWSFSGPGNDSRENTQSDISGTISYAAVNNNQDQASSPKIQIDVKPAKIQNSAHRRTMFTMNESCQQTPATAHHGHSTGAHNQTSHSTHVRSKKHHDVFALTCDKGGCNCDAHHSTPTPSLFPNTLVFATDKHTMSKHFMTPIGPLQLTAEECNEILMKRAAAASNQSNNVASSQTEAAAHFGHVLTHVNTSQIDTKPKPQQDIGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPFQCRECKKSFTLKHHLVTHTRVHTRERPFVCPECGKAFPLKRHLVTHSKFHTGERPFVCXXXXXXXXXXXXXXXXXXKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKSDLIAHSKIHNSSNSDSDTKPFTCRECGLEFNNREAQTLHLRLHSADRTLVTDLCGLAATFQQTTGHFLTANTSSSHQMNGPLGSSSAVSHMHGATQTSPPVGSGPKPKPHICPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHICDKCGKAFFQKNHLLLHQRQHMDPPPSIVRQQQRQAAQAAAQAAQQAASGGGTVITVDGTQTCVDTKAIALQAIQQVQQQVQQQQQAAQQAAQQQAAAAAAAAQQAQQQQQQQQASQQQQQQAAQQQQAATAASSAAAAGSCPTTSGAATSCCGTTAAATTTTTTASSSTASSATTAAGTTAAAAATVFRGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144040;
90% Identity: iTF_01036491;
80% Identity: -