Basic Information

Insect: Nasonia giraulti
Gene Symbol: -
Assembly: GCA_000004775.1
Location: GL276600.1:1273399-1281864[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00038 0.025 14.7 4.1 1 23 219 241 219 241 0.97

2 11 1.2e-05 0.00078 19.5 1.5 1 23 247 269 247 269 0.98

3 11 0.00024 0.016 15.3 2.0 1 23 275 298 275 298 0.95

4 11 0.004 0.26 11.5 3.5 1 21 304 324 304 326 0.95

5 11 0.00012 0.0078 16.3 1.9 1 23 332 354 332 354 0.99

6 11 7.6e-06 0.00051 20.1 0.3 1 23 360 382 360 382 0.98

7 11 0.0003 0.02 15.1 1.4 1 23 390 413 390 413 0.97

8 11 3.2e-05 0.0021 18.1 2.6 2 23 420 441 419 441 0.97

9 11 0.00012 0.0078 16.3 0.3 1 23 447 469 447 469 0.99

10 11 0.0026 0.18 12.1 7.1 1 19 475 493 475 498 0.91

11 11 1.3e-07 8.7e-06 25.6 1.2 1 23 512 534 512 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00038	0.025	14.7	4.1	1	23	219	241	219	241	0.97
2	11	1.2e-05	0.00078	19.5	1.5	1	23	247	269	247	269	0.98
3	11	0.00024	0.016	15.3	2.0	1	23	275	298	275	298	0.95
4	11	0.004	0.26	11.5	3.5	1	21	304	324	304	326	0.95
5	11	0.00012	0.0078	16.3	1.9	1	23	332	354	332	354	0.99
6	11	7.6e-06	0.00051	20.1	0.3	1	23	360	382	360	382	0.98
7	11	0.0003	0.02	15.1	1.4	1	23	390	413	390	413	0.97
8	11	3.2e-05	0.0021	18.1	2.6	2	23	420	441	419	441	0.97
9	11	0.00012	0.0078	16.3	0.3	1	23	447	469	447	469	0.99
10	11	0.0026	0.18	12.1	7.1	1	19	475	493	475	498	0.91
11	11	1.3e-07	8.7e-06	25.6	1.2	1	23	512	534	512	534	0.98

Sequence Information

Coding Sequence: ATGTCAAACGTAACAACAATAAAGTTAGAGGGGAATCAGGAGTCTGTAACTGAAATACAGACCTACCTCGAATCTTTTAATAAGGAAATTGAAGGTGGTACAGGGGAGCAGTTGCAGCATGTACAATTGCAACAAGTAGAGGGGCTTACAGGAGAAGATGGTGGAACATATTTTGTTGATCAAAATGGCCAGTATTATTACCAAGCTAGTGGGGATGACACACCTGTTCTTACACAAGTGCAGATACAAGAAGTAAATGAAGGGGATGGTCACCTTGAGGAAGGTTCTAATGAAGAACAGTATCAAGAAATAGAACAACTTGAACATGTTGACACAGATAATAATgtACAAACATCAGACAATCAGATGGTTCTTAATTCTGGGGAAGCCTATCAAACTGTTACAATTGTTCCATCAGATTCAAATCCTGGAGAAGTGAGTTATGTTCTCATAGTGCAACAGCCAGATGGTGAAAagagtgaaagaaaaattgaaaatgaaaatgggGAAGGTGAGGATGGTGAGCAAGATCTTACAGTCTATGACTTTGAAGATAATGAAGACAATGATGCTGCTATTGAATCTGAGGTTGAAgacgataaaacaaaaattgtcaAATTTATTCCAAAGAAGTCTCAAACTGTCAGTCAAGCTCATATGTGCAACTACTGCAACTATACCAGTCCCAAACGTTACCTTTTGTCTCGGCATATGAAATCTCACTCAGAAGAGAGGCCTCACAAATGTAGTGTTTGTGAAAGAGGTTTCAAAACTCTAGCTTCACTTCAAAATCATGTCAACACACATACTGGAACTAAGCCTCATAACTGTAAATTTTGTGACAGCGCCTTTACAACTTCAGGTGAACTTGTAAGACATGTTCGATACAGACACACTCATGAGAAGCCACACAAATGTAATGATTGCGACTATGCTTCTGTAGAACTGTCAAAGTTGAAAAGACATATTCGATGTCATACTGGCGAGCGACCATATCAATGTCCACACTGTACATACGCAAGTCCTGAcacatttaaattaaaacgtcACTTGCGTATTCATACTGGTGAAAAGCCATATGAATGTGATATCTGCAATGCAAGATTTACTCAGTCCAATAGTTTAAAGGCTCATAAACTTGTTCATAATGTTGGGGACAAACCTGTCTTTCAGTGTGAACTTTGTCCAACAACGTGTGGCAGAAAAACAGATCTCAGAATTCATGTACAAAAACTACACACCTCTGACAAACCGTTAAAGTGTAAACGATGCGGTAAAACATTCCCCGATAGgtaCAGTTACAAACTGCACAGTAAAACACATGAAGGCGAAAAGTGTTACAAGTGCGATCTCTGTCCCTATGCTTCAATATCAGCGCGTCATTTAGAAAGTCACATGCTCATTCATACGGATCAAAAGCCATACCAATGTGACCACTGTTACCAATCCTTCAGGCAGAAGCAACTTCTGAAGAGACACTGCAATCTTTATCACAATCCTAATTACGTTCCGCCGCCTCCACAAGAAAAAACTCACCAGTGTCCAGAGTGTGAGAGACCATTCAGACACAAAGGTAACTTGATCCGTCATATGGCTGTCCATGATCCAGAATCATCATTACAAGAAAAACAACAAGCTTTAAAAATAGGAAGgcaaaaaaagattcaaataATAGATGGACAGAGAGTAGAAGTCTTAACAGGTTATGAAgatgacgaggacgaggaagaagaagaggaggaagaggaagaagaagatatGATGGCAGTTGAAGGAAGTGATGGACAGCAATACGTCGTATTGGAAGTCATTCAATTACCAGATAATCAAGCTGCAGAGCAaGGAATGGCAGTTGTAGCTAGTGAAGATGGAGATTTAGTAATGCAAGATCCACTGAGTCAAGAAAGTGGCATTGTTGCTGAAGCTGGAGATGAAATTATGGAACAAGATGAAACTCAAGAAATAGTTGGATCACTAAAACTTGAGGAAGTACCAATAACAAAGAATCTCCGAAGAAGCGATCCTAAACTACAGAAAGATATGGAGACTTGCTTCGGATTTGATGAAgaagacgaagaagaagaagaagaagaaagtggaGATATACGAATACTTCAGGGTATTTCGTAA
Protein Sequence: MSNVTTIKLEGNQESVTEIQTYLESFNKEIEGGTGEQLQHVQLQQVEGLTGEDGGTYFVDQNGQYYYQASGDDTPVLTQVQIQEVNEGDGHLEEGSNEEQYQEIEQLEHVDTDNNVQTSDNQMVLNSGEAYQTVTIVPSDSNPGEVSYVLIVQQPDGEKSERKIENENGEGEDGEQDLTVYDFEDNEDNDAAIESEVEDDKTKIVKFIPKKSQTVSQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHNCKFCDSAFTTSGELVRHVRYRHTHEKPHKCNDCDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICNARFTQSNSLKAHKLVHNVGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCYQSFRQKQLLKRHCNLYHNPNYVPPPPQEKTHQCPECERPFRHKGNLIRHMAVHDPESSLQEKQQALKIGRQKKIQIIDGQRVEVLTGYEDDEDEEEEEEEEEEEDMMAVEGSDGQQYVVLEVIQLPDNQAAEQGMAVVASEDGDLVMQDPLSQESGIVAEAGDEIMEQDETQEIVGSLKLEEVPITKNLRRSDPKLQKDMETCFGFDEEDEEEEEEESGDIRILQGIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691377;
90% Identity: iTF_00287496;
80% Identity: -