Basic Information

Gene Symbol
mybL
Assembly
GCA_000004775.1
Location
GL275014.1:608396-612088[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.0039 3.1 7.7 0.0 22 46 233 259 219 259 0.84
2 6 4.1e-11 3.3e-08 33.2 0.5 1 44 265 310 265 312 0.96
3 6 1.5e-05 0.012 15.4 0.1 2 43 320 365 319 368 0.95
4 6 2.6e-15 2.1e-12 46.7 0.0 1 45 374 419 374 420 0.93
5 6 3.9e-10 3.2e-07 30.1 0.3 4 44 430 470 427 476 0.91
6 6 4.9 4e+03 -2.3 0.0 3 14 507 518 506 520 0.89

Sequence Information

Coding Sequence
ATGAGTGATGATGAGGATAACCAAAGTTTGCTTGACGAAATTCAAGCATTAGATAATATATTATCACAGAAACAAGTTGCGACAAATACTGATGGTGCTATTCCCGTTACTTTGAATATTACACAAAACCATGTACCAAAACAAGAAGGAACCTTCGCAAGCGATTATCACGAAGAGAAGGTATCCAGGGATTCTGATGAAGAATCTGTCGTTGATGACCTTTACGCAAACTATAGCTGTAATGACTTACAAGATTTATTAGAACTGAACAAGAAATTAATCGAATCTGTCTTAAAATCTCGAGACAAAATGGTATGTCTTCTTGATGACTGCGTGCAAAAGCAAGAAGTAATCAAAGAGCAAATTGGCAATACATTTGTTAGAAGTAATAAAATTGTCAATTTGAATGCTGGCATGCCTTACTTTAAGGACAAAAACTACTATTCAGCCAAAAGAAATGAAGATACTGAAactaaaataagaaataatgaaCTGCGTTTGACAGAATTACAGCGTATTCATCGTTGGAATCATctggataaaaataatttattgaaagcCATAAGGCATGAGGTCACATTGACTGTACTGAAAAAGAGTGAAGATGAAATCAACATTGAGTCTGCAATTACTAAAACAAGTCAACTGCCCAGTGATGTCAAAGAAGCCATTGGCTCTTTGGGCTCAATACAATTTGATTGGATGAAAATAGCAAATAATATACCTGAGAATAAACACACTGCCGAAGAATGTGAAGTCATGTGGAACAATTTTCTACATCCtaaaatcaacaaacaaaaatggaCATccaaggaaaataaaaatttaaatcgtaTAGTGGAACAACATGACTTTGAAAATTGGGATGCTATTGCCAAAGACTTGGGTACAAATCGTAGTGGTTATCAATGTTTTATTAGGTATAATACCAATAACTGGAAAAATCTCATGAAAGGTCAGACATGGTCATACAATGATGATAAGACTCTTGCCCATCTGGTatccaaattgaaaattggaGATTACATTCCCTGGGGATACATTGCCAGTTGCATGAGCAACTGGACAAAGCAACAGgtTTACTTTCGATGGATTTACAGTTTAGCACCCCacttaaaaaaaggaagatttTCCAAAGAAGAAGATCAACAACTTCTGAAAGCTGTGGAAAAATATGGGGAAAACTTTAGTAAAATAGCTGCACTTGCAATGCCTAATAGAACTAATATTCAATTGAAAGAACACTATTTAACATTAACAATGAAACTGATTGGTGGTAAGAAAATCTGGACATTACAGGAAGACGAGAAATTAATTgcattacaaaaaaagtatggCCAACAATGGGTAAAAATTGTAAGAGAATTACCAGGCGTTACTAGAGTTCAAGCAAGACAGCGTTATTCTTCTATTTTGCGATATCAGAAACGTGGTATCAAAGTGCACATGATTGATAGAGAAGAGCGTATGGTGCCATGTCAACCAGAGCATACTGTTGTAACTTATACTAACAATACACCTTGGTCTCGCGAAAATAAGGAGATATTCGTGAAGCATATGAAAGTTGATGACTATctcataaattttttcaagagagaaaaatcaaatatgaAATTGATCAATTGGAACAAAGCTTACAATCCTGTAAAATTAAGAGAAGATACAAAGAAGCTTTTTAATACTTTAACGCAGTTGAATGCGAATTTAGATATATTATCTAATTTTGACGACGATTTCGACTCAGATGAAACAAATCAACAACTGTTAAGTTCTTTGCAGgattatattaatgaaaagcAGAATAGCATTTTTAGTCAGGAAGTTAAACTAATGGCACTTAGAATGTGTGGATCTTTAGAAGCAGCACCTGAGAGGGAGCGATTTATACCTCCCTTGCCATTTGGTTTTTGTGCTCctaaatctaaaataaagaatttcaaCACTATCAATTATACTGCTAAACCAAATGAACATCAACGCAACAAAATGGAATTGGAGATGTTTTTTACACCAAATCTAAATGTAACAGAATATCTTGGAGAAAACATAGATAATCAGTTTGAAAAGCTAAAAAATCTGTTCATATCTAGTACAAAGACGCAAAAAAGAGTTTATTCCTTAAAATGTAAACAATTTGCTAAAACTGATTTATTTGTAGACTCTCCAGAAGataatattattaAGTCACCAACTTATGGtgcaaagaaaattaaatatgattGGGAGCTCAATCAAATGATCTCTGAAGACTCAACaacggaaaaaataatcaatgtaGAAGAACATCCATTATCACTGATAGAACCAAATAGAGCAATGCTTCAAGCATATCAAGAAATTTTACTCACTTCTGCAAGTTTTCCATCAGCTTCTGATGAGATACATCTGCAATACAAACTGTCCCACAAAGGTCGCGAAGCTCTACACTTGTTCAAAAAACGTTATGAGCAATTATTTCAGATCCCAGCTGGTTTATCCAGAATAGTGCCCCCAGACACTGTTGATGAAAGCGCATTTTTACCTATCGTGGAAAAACTCAAACACAAGAAGAGTCTGAAGACAAAACGTTTGAAATCGACTGCAAAACAGTAA
Protein Sequence
MSDDEDNQSLLDEIQALDNILSQKQVATNTDGAIPVTLNITQNHVPKQEGTFASDYHEEKVSRDSDEESVVDDLYANYSCNDLQDLLELNKKLIESVLKSRDKMVCLLDDCVQKQEVIKEQIGNTFVRSNKIVNLNAGMPYFKDKNYYSAKRNEDTETKIRNNELRLTELQRIHRWNHLDKNNLLKAIRHEVTLTVLKKSEDEINIESAITKTSQLPSDVKEAIGSLGSIQFDWMKIANNIPENKHTAEECEVMWNNFLHPKINKQKWTSKENKNLNRIVEQHDFENWDAIAKDLGTNRSGYQCFIRYNTNNWKNLMKGQTWSYNDDKTLAHLVSKLKIGDYIPWGYIASCMSNWTKQQVYFRWIYSLAPHLKKGRFSKEEDQQLLKAVEKYGENFSKIAALAMPNRTNIQLKEHYLTLTMKLIGGKKIWTLQEDEKLIALQKKYGQQWVKIVRELPGVTRVQARQRYSSILRYQKRGIKVHMIDREERMVPCQPEHTVVTYTNNTPWSRENKEIFVKHMKVDDYLINFFKREKSNMKLINWNKAYNPVKLREDTKKLFNTLTQLNANLDILSNFDDDFDSDETNQQLLSSLQDYINEKQNSIFSQEVKLMALRMCGSLEAAPERERFIPPLPFGFCAPKSKIKNFNTINYTAKPNEHQRNKMELEMFFTPNLNVTEYLGENIDNQFEKLKNLFISSTKTQKRVYSLKCKQFAKTDLFVDSPEDNIIKSPTYGAKKIKYDWELNQMISEDSTTEKIINVEEHPLSLIEPNRAMLQAYQEILLTSASFPSASDEIHLQYKLSHKGREALHLFKKRYEQLFQIPAGLSRIVPPDTVDESAFLPIVEKLKHKKSLKTKRLKSTAKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01274403;
90% Identity
iTF_01486977; iTF_01036947;
80% Identity
-