Basic Information

Gene Symbol
Arid2
Assembly
GCA_000004775.1
Location
GL274073.1:2952817-2986065[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-25 1.6e-21 76.2 0.0 2 89 24 109 23 109 0.95
2 2 2.5 6e+03 -2.6 0.2 50 71 572 594 559 604 0.66

Sequence Information

Coding Sequence
ATGGCCCTGCAGCAGAGCCCCGCTAATCAGCAGCAGGCCGCCAAGGACCCCGTCAGCTACGAGCGGCTGCGCGAGGCCTTTATTAGGGACCTGCATCACTTCCACGACACAAGAGGGACACCGTTCAAAAAATGTCCAAGGATAGACGGAAAGGAGGTGGATCTCTACAAGCTCTACACAGTTGTTACAGCTCGAGGTGGATGGATACAGGTGAACAACAAGAATGAGTGGGTGTGGCTCTGCGAGGAGTTCCATCTGCCCAGCGGCTGCGTCAATAGCGGCGTCGGCCTCAAACAAATTTATCTTCGATACCTGGACAGATACGAGAAGGTACACTTCCTGGGCGAAGACGGTCACCaaggcgacgacgatgacgaggactCGAGGCATAGAAAGTGGAATGCCAGGTCCCTTCATTCCGTACCGCTGACCTACAATCATCATCAACACAACGTTGCAGAATCGCTGCGAGAGTACAACGGACTGTCGTCGGATCTCTACAAGCCGTCCAACTACGAcaagctcgcgctctcgttgCTTTCACCTCTGCCGAACGAGCAGGACTTCGCCATCAACGTCTGCACCTTCCTGTCGAACGAGGGAAAGCACGCATTGAGGCTAGACAAGTATCCGCGACTCATCAACCACCTGCTCGCTCACGCGGGCATTTTCGACTCACCCGGTACGAGGCAGCTCTTCATTGAGGTCTACTCCCGGGTACGCAACTACTCCATCAACTCGTTCTGGCCGGATGTGCTCGACGCCCAGGATGTCCTGGATCTCACCGACGAGAGGATCTTTATCAAGAAGCCCATCACCGCCAACAGCCAGAGGTTTATCAGGAGGAGgcaggagaaggagagacagAGGAATCAACAGAGTGACGTTGTCACGTTGGACGATGCACCCTGTCCCATGGATATCGATAATGGCCCGCTTGAGTGCGACAGGCTAGAGAACGGTATCGAGATCCTGGAGGAACGACTCAACCCGCACCTCATCGACGAGAACTCGACCTCGTCCAACACCTCTTCCACGTTCAAGGATCAGAATCAGAACTCGATAAAGTTCGAGGACGACGATAAGGACCTGTTCTGCGTGGGCAGGACCCTTGGCACCCAGGACCCGTATGGCCAGCGCGTCCTCCAGATCGCCTCGATCCTACGCAACCTCAGCTTCACGCCCGAGAACGCTGCGGTGCTGGGCAGGTCGCGCTCCTTCCTCAGATTCGTTCTGCTCTGCGTGCGTGCTAGGTGGTGTAATCTACACCAGCTCGGATTCGACATCCTTGGCAACATTGCCAATGAGATAATCCTCAAGGATGCCGGTGAGAGGCTGACCAGCGTTATACTATCGAGCGTCGCGAAAGGCATCGACTCGCCCGACAGATTCATCGTAATCAGCTGCCTGGAGATACTCAACAAAGTCAGCCAGCAGGATCTCAACGAAGAGACGCTAACCTTCGGTTTAGATGACAGCGTCTACGAACTCATTTGCAGATTCCTAGCTCTGAGTGACATAGCATTGCTTGTCTACACCCTCGAGTGTCTCTACGCGCTAACGTCTCTGGGAGAGCGCCCCTGTACGAGTGTGGCGCGAGTGCGCGGCGCCATCGATACCCTTGTGGCTCTCGTGACCGTCGAAGCCCAGAGCTACGGTCCAAAGGCCTGCATACTTATGCGCGTCGTTGAAACCGTCTCCTCAGTACCTgccagccagcagcagcagagtccACAAGTGGCTCAGCAATCGTCGCCGTCCCAACAGCAACAATCGCAAACCATAAGtgcagccgctgcagcagctgcttcGAGTTCGGTGCACCATCACGTGAGCACCGCCCCATCGCAAGGCGCACCCATGGCCACGAGTGTTAGTGAACCCACTGGTCCCGATGGACAGGTTGGTAGTACTGGCAGTCCCAGTGGTAGTGGCCAAGTGACGGAAGTTGTGGCGGTAAGATTGGCGCCGCACCAGATGCAACAGGTCAAGCAGCAACAAACAGTGCAGACTGTACAAGCAGCCCAGGTGGCTCAGGTGCAGGCACAGTCGCACACGCAACAAGCACAAGCACAGTCGGCCCAACCGATACAGGCGACGCCGACGAAAGCGAATGCCGCCGGTGGATCGTCCAGACCAAGTACTCCCAAAGCTGCTGCAACAAaAGCAGCTGCAAATTCGTTGCAACAGCAACACACTCATCAGCAGATTATCCAGGAAAACGAGCAGTTCGCTCTTGGTTGGCTAAAGGCCACCTTTGAACTCTCTCCTGGCGTGAGAATAGAGCAAGAAGAGTTGTACAAAAAATACCTTGGTTGTTGCACAAAGATTGGTAGAAGAGGTGTGATTGCTCCCCTACATTTTCCTCGATGTGTCAGGTCCGTTTTTGGAGGAACGATCGGACCAAATCCTATCAAAGGCGAAAACACTGGCACATTGTACTACGAAGGCATTCGAGTACGTGCAAATCCCGGTCAAGTGACATATCCGCTTAAAGGTGTGACCCGTCCCAACGTAACAGGGGCCCAAGCAGCTGAGAACGCGTCCGGCAACGTCGTTACTATCGTAGGCGGCACTAGTAACGTCAATTCAGCAAAGGTGCAGCAACAGCGTAACGATAGCACGCCGATACAAGTCACGCCGTCCTCCCCAATCCTTAAAGCTCAACTATCCGCTCCACCGAAACCTTCAGTGCATCCTGATAGTCCATTATCTATAGCCCCAAGCTCCGCCGCAACTGGCAATATTTTCCCAATCGAGCCCAGAAGTAAGGTCTCTGTTGCACATCCTCATCTCAGCCAGGCACTTTTAGCAAGTGGAGCTCAGCAACAGGCAGGCCAGCAGCAACAAGCTCAGCAAGTGCAGGTGATCGTAAAGGATGACGGCCGGGGAGGCACCACTTCAAGTTCCATCATTAAAAGCCTACTGGCTACCAAGGTAACGGTCGCTGGCGAGTGCATGCAagccgtcgccgtcgcgacTTCTTCCTCTTGTGTGTCCGCTGTGCCGGCAATAACAAACGCCACAGGCGTAGTATCCAGCATCAGTGCCAACCAGCTAATAACAAGCAACCAGGTTGCTCAACgtcaacaacagcaacagcagcagcgtcaacAGCAAATGCAACAGACACCAGGTGCGACTATTGGAACGAAAACAATTATCAATGCCAAAGGCAAACCTACCATCGTCGCTGTCAAGAAAGTACAGAGGCTCAATGGCGCAAAAGTCATCGTTGCCAACAATGGCGAAAAGcCTGAAGCAATGGACACAGATAATGGTCTACACGCGACAACAAATCAACAAACACAGTTGGCAATAGCAAGTATTGTTCCACCCACCAGCATAGACTCATCGAACCACGTAACCGGAGTTATGCGCGTATATCGAGGTCCGGCCACTCAACAAGTAACGTTGACCACTGCTAGTTCCACAACAGGATCTGGCAAACAATCGAACCAACAATTGCGAAACGTGTGCACACCGATTGTCGAAGACTCGGATTCAACTAACAATTCGTTGGCTTCATCGAGCGGAATTGGTGGCAGTCGCGATTGTTCTGGTGTGGGagccgaagaagaaaactCCCTTACCAGTTTCGAAGGTATTCTGCTCAATGGTGCGCCAAGTAACCTCGATATCGATGCTCAAGACGACGGTTCATCAAAGGACTCGTCAAGCGTTGGCTCAAAGGAGAAACCCTCGCAAAGTATGATGCTGGCTGATCTGCTTGAGCGAAAGGTTGAGAAGGAACCGATCATGAATGGTGTTTTAGGGAAAAAGGATCTCGTCGAGAATCATATTAAGAAGGTAAGGgTACTAAAAGAATCTCCGGGAGATGTGAAGATCAAAGCTGAGGTGTCTGAAGACGCATTGATTGAGGCACCAGCTCGCTTAGGTATTAAACGAAGTGGAAGTACAGTAACTAACGAAGCTGATGAATCATGTGATGCCAAGAAACCCAAGTATTCGAATGGCACAACATCACCCGATCCCGCCGTAGTTGACTCGACTACGATATCAAGCATCAAATCTGAAGAACAAgatgatgaaaaagaagagaaggtTACAGTTTCATCAACCGCAGCAAATTTATATGCAGCGCTTGCTGCAGATATTATTGATGACGAAACGGATTTGGAAGAACCCTCAGTGAAAGAGGAAATAAAACCTGTGgtcaaagaagaaataaaagcgGAACCATCGACACCTGtTGCAGTAAAACAAGTTGCTGTAAGTCAAGAACAACTACATCCCGTTCAGCAGCAAGTCCAAGTCCAGACCCAAGTACAGCCAGTCCAGGTTCAAACGGTAGCTCAAGCACAACCGCAGCAGCACCACCCAACACATCAAACTATTGCAATCACGCAACAGCAGCTTCAGCAACAACTACAACAGGGTCTGATAGTTGCTGCAGCACCGCGTCAAATTGTAGTACAGCAGACCATCCAATCTAATAATCAAATCGTTACGATTCCGGCAATGAAAAGCCGGCCACAACACCAGATTCAACCTCAAGTTCTACAGGTGCAACAAGGTCCTGGTGGCCAAACGCATTACGTGATCTCGGGTGGCGTACCGGGACAAAATTATGTGTTGGCGCAGCCGCAGACAGCTCTTGTCCAGGGTCAGGCGCAGACGGTGCTCGTAGCACAGCAGCAAGGCACAAATGCCAAgacgataattattttgcaacCACAAGCAGCTGCGCAACCGCAAGCTCAAAAAATGGTTGCTGTTACACCACAAGGCCAACAAGTCGTTGTAACACAAGTACCAAGACCACTTATGCAAAGTCCAGCGATGGGCAACATCCCACCGCCTCTAGTACCTACGTCTGGAGCCATCAGTCAAGCTTCTATTGTAATGAACAGCGCCGTTGCACAACAGATACAGCAGCAACAAGATCAAGTTGTATCACAGCAGCAAACGATAACACAACAAAAAATCACTCAAGTTCAAGCGCAAATACAACCCGCTGCAAACACGGTAACGTTAGTGCAAACTCAGCAAGCAGCTGCAGTGGCCACAACTGCTGGAAATTCTGCGCCCTCTCGTGTGGTTACACCTACTCCAGCATCAACACCACCACCTACCAGGCCCACAACTCCTCGTCAAGCTGCAGCAACAAATCAGACGCCAGTGACTGCACCGACAAAACCTCAGCCACAGCTTATAGCCCCTTCGCCTCGTACGTCGACTGAGACAAAGGAAGTCGTAATGGTAACCGCTGCAACTTCAACAGAACCAGAGAACACGGAAAGTACTGAGGATAATAATACAAAGAAATCACTGACAAGTCAAGAAACATCGACATCTAGACCGCAGTCACCAGCAACTCCTATGAAAACTATTACAGTCACTTTAGAACGCAATGCATTTCTCTGCGAATGGAGAGGCTGTTTCAAgcaatttaaaaatccacGAAAAGTGTATCTGCACGTTGTTGAAGCACACTGTCCAACTGGAAATGAAGAAACTCTTTGCCAGTGGGCTAGTTGCGACGGTTTAAAAAGACGAAGATTTTCGTTGATGACTCACTTATTCGACAGACACTGTTGTGATGAGATAATGTTGATGAGAAGGAAACAGTTTGATCAGTCGGGTAAAACGGAATATCTGACTAGCAAGCCAGTTGCCTCGCCAACACATCACCCCGGCTATGCTCCAAACGCCGCGTTACATGCTATTAAGAGGCACGCTTTAGAATTTGTCAATCCTAAAGAATTAATGCAAAGGCCATCGAAGCCCGCTGCGGCCAACGCTAGCTCCTCTTCCCCCAGACCCGGGCAAAATCCTCCGCCGGAACAGgaTGATAATGAAGGACCTGTAACAAAAAGTATTCGCTTGACGGCAGCTCTTATTCTCAGAAACCTAGTCATATATTCCGCGCATGGCAGAAGacaTCTTCGAGCGTATGAGCCGCACTTGGCAGGTGTAGCGTTAAGCAACGTCGAATCATCGCGGACGATCGCACAAGTCCTGTACGACATGAATGACCAGAGTAGCAGCGGCCACAGGTGA
Protein Sequence
MALQQSPANQQQAAKDPVSYERLREAFIRDLHHFHDTRGTPFKKCPRIDGKEVDLYKLYTVVTARGGWIQVNNKNEWVWLCEEFHLPSGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGHQGDDDDEDSRHRKWNARSLHSVPLTYNHHQHNVAESLREYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTFLSNEGKHALRLDKYPRLINHLLAHAGIFDSPGTRQLFIEVYSRVRNYSINSFWPDVLDAQDVLDLTDERIFIKKPITANSQRFIRRRQEKERQRNQQSDVVTLDDAPCPMDIDNGPLECDRLENGIEILEERLNPHLIDENSTSSNTSSTFKDQNQNSIKFEDDDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLGRSRSFLRFVLLCVRARWCNLHQLGFDILGNIANEIILKDAGERLTSVILSSVAKGIDSPDRFIVISCLEILNKVSQQDLNEETLTFGLDDSVYELICRFLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSSVPASQQQQSPQVAQQSSPSQQQQSQTISAAAAAAASSSVHHHVSTAPSQGAPMATSVSEPTGPDGQVGSTGSPSGSGQVTEVVAVRLAPHQMQQVKQQQTVQTVQAAQVAQVQAQSHTQQAQAQSAQPIQATPTKANAAGGSSRPSTPKAAATKAAANSLQQQHTHQQIIQENEQFALGWLKATFELSPGVRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPIKGENTGTLYYEGIRVRANPGQVTYPLKGVTRPNVTGAQAAENASGNVVTIVGGTSNVNSAKVQQQRNDSTPIQVTPSSPILKAQLSAPPKPSVHPDSPLSIAPSSAATGNIFPIEPRSKVSVAHPHLSQALLASGAQQQAGQQQQAQQVQVIVKDDGRGGTTSSSIIKSLLATKVTVAGECMQAVAVATSSSCVSAVPAITNATGVVSSISANQLITSNQVAQRQQQQQQQRQQQMQQTPGATIGTKTIINAKGKPTIVAVKKVQRLNGAKVIVANNGEKPEAMDTDNGLHATTNQQTQLAIASIVPPTSIDSSNHVTGVMRVYRGPATQQVTLTTASSTTGSGKQSNQQLRNVCTPIVEDSDSTNNSLASSSGIGGSRDCSGVGAEEENSLTSFEGILLNGAPSNLDIDAQDDGSSKDSSSVGSKEKPSQSMMLADLLERKVEKEPIMNGVLGKKDLVENHIKKVRVLKESPGDVKIKAEVSEDALIEAPARLGIKRSGSTVTNEADESCDAKKPKYSNGTTSPDPAVVDSTTISSIKSEEQDDEKEEKVTVSSTAANLYAALAADIIDDETDLEEPSVKEEIKPVVKEEIKAEPSTPVAVKQVAVSQEQLHPVQQQVQVQTQVQPVQVQTVAQAQPQQHHPTHQTIAITQQQLQQQLQQGLIVAAAPRQIVVQQTIQSNNQIVTIPAMKSRPQHQIQPQVLQVQQGPGGQTHYVISGGVPGQNYVLAQPQTALVQGQAQTVLVAQQQGTNAKTIIILQPQAAAQPQAQKMVAVTPQGQQVVVTQVPRPLMQSPAMGNIPPPLVPTSGAISQASIVMNSAVAQQIQQQQDQVVSQQQTITQQKITQVQAQIQPAANTVTLVQTQQAAAVATTAGNSAPSRVVTPTPASTPPPTRPTTPRQAAATNQTPVTAPTKPQPQLIAPSPRTSTETKEVVMVTAATSTEPENTESTEDNNTKKSLTSQETSTSRPQSPATPMKTITVTLERNAFLCEWRGCFKQFKNPRKVYLHVVEAHCPTGNEETLCQWASCDGLKRRRFSLMTHLFDRHCCDEIMLMRRKQFDQSGKTEYLTSKPVASPTHHPGYAPNAALHAIKRHALEFVNPKELMQRPSKPAAANASSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSGHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01274265;
90% Identity
iTF_01274265;
80% Identity
-