Ngir011566.1
Basic Information
- Insect
- Nasonia giraulti
- Gene Symbol
- retn
- Assembly
- GCA_000004775.1
- Location
- GL275278.1:286078-335075[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 9e+03 -3.1 0.1 66 82 191 207 184 208 0.65 2 2 1.6e-26 3.9e-23 81.4 0.0 2 89 214 299 213 299 0.96
Sequence Information
- Coding Sequence
- ATGCTCGATAGCGGCATTATCGGGCGACCTACTACTACGTACCCTCCGACTAATCGCTCCTCGATTCTCTGCTTGCAGTCGCACCAGGAAGAGGATCTGTCCGACCCGGACCGCCAGGACGAGGAGAGCGGCGAGGAgctgccgcagcagccgctccAGGCTAACAACCACTCGTCCGCGGACAACACGCCGGTGCCCACGCCGCTCTCGCACCTCAACAGCCTCATGAGCTCGAGCCACCCGCACTTCCTGGCCAAGATCAAACTCGAGAACGAGATGGACCTGCTGAACAACAAGAGCGGCCTGGAGGCGCTGCAGGCGGTGCAGGCGGCGATGGGCGGCGGGGGCTTCAACCTGCCGTTCTCCTTCCCCAACCCGAGCGCCTTCCTCAAcctcggcgtcggcggcggcaacaaCGTGCCCTCCTCGGCCAGCTCGCACTCGAGCGAGTCGTCCCAGGGCAGCGGCCGCAACGGCAGCGTCCTCGAGACCGCCAACCGGGAGTCCGTTCCCGGAGGCGGCGCCGGCGGCGTGCACTCCCCGAGCGGCTCCCAAGCCCAGCAGGCGCATCAACAGCAGACCAGCTGGAGCTTCGAGGAGCAGTTCAAACAGTTGTACGAAATAAACGACGACCCCAAGAGGAAGGAGTTCCTCGATGACCTGTTCAGCTTCATGCAGAAGCGAGGAACGCCGATCAACCGACTGCCCATCATGGCCAAGTCCGTGCTGGACCTCTACGAGCTGTACAACCTGgtgatcgcgcgcggcggcctcGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGTCTCCACCTTCCGTCGAGCATAACCTCGGCCGCGTTCACGCTGCGCACCCAATACATGAAGTACCTCTACCCGTACGAGTGCGAGAAGAAGCACCTGTCGACCCCGGGCGAGCTGCAGGCGGCGATCGACGGCAACCGGCGCGAGGGCCGGCGCAGCAACTACGGGGCGTACGGGGGCGGCGGCGAGgccggccagcagcagctgatgcACCACCAGCGCAGCCCGCACGCGCCCTCCTCCCTGGCCTCGCTGCACCAGCAGATCTCGCCGCTCTCGCTGGTCTCGGCGGCCGTGCAGcaggccgcggcggcgagcggCCAGCACCAGGTCGGCCCGCAGAACCCGGTGAACGGCAGCGCGGCGCACACGCCCCTGCTGCACCACCCGCACCACCCCCAGCACAGCCAGACGCCCGTCGCGGGCATGGCGCCCGAGTTCGAGGCGCACATGGCCGAGTACGTCAAGCGGCTGCAGCACGAGATGCGGGTGCGCAGGACCTCGCCGAACCGGCTGATCCACCGGCAGGGCAGCGCCTCGCCGCCCCCGGCCAGGTCGCCCTCGCGCGACGCCGCCATCCTCGAGATGTCGCGCTTCACCCTCTGGAACATGTACAACAACAACCTGCACCCGGGCATCGGCTACCCGCCCTCGGCCGTCTCGCCGCAGAACAGCTCGCACTCGCCCCCGCCGCAGCCCGGCAGCCCCGAGCCCCAGAAGGAGGCGCTCGACCTGGGCCTCAGGTCCTCGCCGGGCTCCTCCTCGCCGGCGCGACAGAGCCCGCCATCGTCCGGCGGCAGCATCGCCATcaagcgcgagctcgagctcaCTAGCGGCACCTCCGCCAGCAAGAGGCTCTGCATGGACGAGGACGGCCCCGCGGAGAGCGCTCTTNNCGCNCTCCCGCCCTCCCCGGCACGCACATCAAGATCTCAAACCGAGGGGACGGCCGCGACAACTCGCTCGTCCGTCAGCGCCTCGACCAACAACAACGAGACCAAGGCCTCGACGCGCAACGTCGTCTCGTGA
- Protein Sequence
- MLDSGIIGRPTTTYPPTNRSSILCLQSHQEEDLSDPDRQDEESGEELPQQPLQANNHSSADNTPVPTPLSHLNSLMSSSHPHFLAKIKLENEMDLLNNKSGLEALQAVQAAMGGGGFNLPFSFPNPSAFLNLGVGGGNNVPSSASSHSSESSQGSGRNGSVLETANRESVPGGGAGGVHSPSGSQAQQAHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPGELQAAIDGNRREGRRSNYGAYGGGGEAGQQQLMHHQRSPHAPSSLASLHQQISPLSLVSAAVQQAAAASGQHQVGPQNPVNGSAAHTPLLHHPHHPQHSQTPVAGMAPEFEAHMAEYVKRLQHEMRVRRTSPNRLIHRQGSASPPPARSPSRDAAILEMSRFTLWNMYNNNLHPGIGYPPSAVSPQNSSHSPPPQPGSPEPQKEALDLGLRSSPGSSSPARQSPPSSGGSIAIKRELELTSGTSASKRLCMDEDGPAESALXALPPSPARTSRSQTEGTAATTRSSVSASTNNNETKASTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01036807;
- 90% Identity
- -
- 80% Identity
- -