Basic Information

Gene Symbol
rcor2
Assembly
GCA_959347405.1
Location
OY365778.1:16375808-16385303[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-09 2.5e-06 28.9 0.0 3 46 132 175 130 175 0.97
2 2 2.2e-11 4.4e-08 34.5 0.0 3 46 366 409 364 409 0.96

Sequence Information

Coding Sequence
ATGGTTTTGGCTGAGAGAAATAATGATGTTCGAAACGGCAAGCGTTCGAGAGGGCCAAGCCCGAATGGGCATGGTAGCCCTGATTCCAGTTCCGAGGATGAGAAtgTAGTGCCATTTGCAGCTGAAAAAATAAGGGTTGGTCGAGATTATCAGGCAATATGTCCTGAATTGGAACCTTTGGAGGCAAGAAAACCTGATCAAATATCAGATAGAGCTCTATTAGTTTGGTCACCTACATGTGATATATCAGATAACAAattggATGAGTACATAACTACAGCTAAGGAAAAATATGGCTACAATGGTGAACAAGCACTTGGAATGTTGTTTTGGCACAAACATGATCTCAATAGGGCTTCTCTGGACCTTGCAAACTTCACTCCTTTTCCTGATGAATGGACAGTGGAAGACAAGGTGTTGTTCGAACAAGCTTTCCAGTTTCACGGCAAAAGCTTTCACAGAATACGACAAATGTTACCGGACAAATCAATTGCATCATTAGTGAAATACTATTACTCGTGGAAAAAGACAAGGGCCCGTACATCTTTAATGGATGTTGTAAGTGAGGGCCGCAACGCTGCAGGATCCGGAACGGGGAAACGTGATTCCGGAGCGGGGTCCGAGCCCGGTGGATCAGATAAAGATTCCGACAATGACGAAAAGGGCGATGGCGGCGAAGGGGGCAAGTGGTGCACCGTCTGCGGCATTCTGTGCTCCCACACCACGCAGCACAACTCGCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACGGGCAGTATGAGGCCGCTGTGCGGTCCGTCGGGGCGGCGGCCCGGCAAACAGCAGCGGTACAAGCACCGCCTGCCGCGCGGCATTTACATCAACCACGACGATCTGGTTGCCATGGCGACGGGGCCGCAACCCGGCGACCGCAACCACAACCACAACCAGGGCGAGGCCGTGCTCAGAGCGATGGACAGAGAGATTATCTCGCTCAAGAGACAAGTACAACAAAACAAACAGCAATTAAGTTCGTTGAAGCGTAAAGTTGGCGACACGGGCGTCGAAGAACTGAGGCCCGGGGAACCACCCGCCAAGATTAACTCCCGATGGACCAACGACGAATTACTAATGGCTGTTACAGCCGTCCGAAAATATGGCAAGGATTTCCAAGCAATTGCAGAAACACTCGGCACAAAAACGGAATCACACATCCGTACATTCTTCATTTCCTACCGTCGCAGATATAACTTGGATGCTGTGCTCAGAGAACACGAAGCAGATAGACATAACGAGAGTCACATACAACCTGgcaCAACAAGTACTGAGTCAAACGACAATGATGTTGACAATAGTAGTTCCAACAACGGAACTGGCTCTCCTCAGACTAATGCTAAGGAGGAAAAGACGGAGGTTGACAGTGAGGGCGTAGCGATCGGCGCTTCGGCTGAGCAGGGCGGGCCACCCACCACGCCGCCCAAACATAAGCATGCCAAGTGA
Protein Sequence
MVLAERNNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAICPELEPLEARKPDQISDRALLVWSPTCDISDNKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNAAGSGTGKRDSGAGSEPGGSDKDSDNDEKGDGGEGGKWCTVCGILCSHTTQHNSHKLCQACLVHARRTGSMRPLCGPSGRRPGKQQRYKHRLPRGIYINHDDLVAMATGPQPGDRNHNHNQGEAVLRAMDREIISLKRQVQQNKQQLSSLKRKVGDTGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTESHIRTFFISYRRRYNLDAVLREHEADRHNESHIQPGTTSTESNDNDVDNSSSNNGTGSPQTNAKEEKTEVDSEGVAIGASAEQGGPPTTPPKHKHAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
iTF_00960115;
80% Identity
iTF_01033684;