Nsyl037429.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Napeogenes sylphis
Gene Symbol
-
Assembly
GCA_959347405.1
Location
OY365787.1:24314136-24318394[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-09 3.6e-06 27.9 0.4 5 44 18 57 14 58 0.93

Sequence Information

Coding Sequence
aTGGCGCGCTATAAGTCTAAAGGGCTTCGAGGGAATTGGTCAGAAGCATTAATGAAATTAGCTTTAACTGCAGTCAAAAGTGGTAAGATGAAAGCATATACGGCTGCAAAGCTTTATAATGTGCCAAGACGCACGCTAAGGCGATATTTACAACAGAAAATAGAGACTAAATCTGCGTTGGGTCGCAAACCACTTCTTAACCCAGATCAGGAGAAGATTCTGGCATCCCGTGTTATTCGTCTGTGTAATGTTGGATACCCATTGACACAGCGTGTACTTCGTAGATGCGTGAAGACATTCTgtgatcaaaataatatatcagcGTCGGGTGGAGAGTTAATGGTAGGACGAGATTGGCTGAGAGGATTTTTAAAACGTCATAGGAATATCAGTAGACGAAAGGCACAGAACCTAAATCGCGCAAGGgcacaaaaactaaataaagctGTAGTTTCCGATTACTTCGCTAAACTAAAGAAAGTCTTGGATGATAATGAAATTATGAATAAACCGAAACGCATTTTTTATATTGACGAAAAGGGTTGCCAGCTTAATTTGCATAAATCACCAGAAGTCTTGGCTGAACGTGGGTCCAAGAGAGTACATTTAGTAGCACCCGAACACGGCGAGAGTGTCACAATAGTTTCATGTGGCAATGCTTTGGGCCATTTGATTCCACCAATGATTCTCTTTAAGGGCAAACGCATGAAGCCAGAATGGCAAGGATACCAGAAGAAGCATACGCTCCCAGCATACCAGCATACTTATAATCCCACAATACCAGGAACTTCTGAAAATCAAGAAAATAATGACCCCAATGACAGTGACGCTACTAATGCTAGCGAAAATCTGTTCACTTCTCAAGAAAATGAAGATCCCAATAACATCAACGCTATTGCTACCAGTGGAAATCAGGTCATTCCCTCGGACAACGCCTCTGAAAATAATCTACAGCACCTAATTCAAGTAGATAAATCAAACTTCACAGAAGCCCAACCAAGTTTTTCTGACGATTCCGATAGCAGCGAtgacatttatttatctttacttaAGCAACACAAGAATAATAAAGACTTGAGAACTGAACCAAATATCTGCTCTACAACACTTAACGAGTCATATTTATCTTTTTgtgcaattttaaaaactccgGAGAAAATTTCAAGCCCAAAAGTTAAACCAAGGGCAAAAGCTATTAATAATCTAGCACAAGAACTAACAAAATCAATGtttaaagagaaaaataatatgCCAGGCCCATCTCAAGTTTCTTCGCAAAAACGAAAACagtgttttgaaataaataatagtaaagcaGTAACCACTAAAGATTCTAAACAAAAAGCAACAGTCAATAGTAACAGAGCAGATCTACCTCTCGTTGTAAAATATGCCAAACAAAAAATTAACTTAGCAAGAGGCGAATTCCGATGGCGCACTAAAAACAATGTGGCGTTTGTAATGTGGCAGGACACTAAGCTCGTCACACTTTTGACCACTGCCTTCCATCCAAAAGTTAATAAGACTTTTTGCGATCGAACCCAGAAAGATGGTATGAAACGGGCTTTTCTGTGTCCATCAACTGTACTTCAATACACAGAGCGCATGGGCGGTGTAGACCGATTTGACCAGAAGCGGATCACCTACGAAGTGGGCAGACGAAGCAAGAGGTGGTGGCTTCGTATTTTCTATTTTTGCGTAGATTTAGCCATCACAAATTCCTTTTTACTCTACTCTAGCAACACAAGAGTACACAACCCACTTTCACATTTACACTTTCGGTTGTGCCTGGCTCGTGGTCTCATCAGCAATTCATCAACAATATTCATCAAGGAAAAGAAGTCTGGACAGGCAGCCACGATACTCCGCAAAACGGCCAAAGATCTCcacaaacagacaaaaagaaGGTTAACGGAATTAGAAGCAACCACAACGATCTCCTGGTTCTCATACGCCTTGGAAAACGAGAAAAACAGGAAGATCACGATAAGAGAACTCCCCGTGTTTACGCCGCTAGAAGATATTATCCAGGTCCTGGCAGAACAGGCTTTGCCGCCGAAATACCCCAAACCTAATACCGGACATTTACAATATCACGTCATTACGAGATATGCCTGGAGTGAAAATAGAAGCCTGGAGAGGAAGGCGCGGCCCGGCACAATGCCACAGGTGACAAGCCTTCCGCCATCCAATTCACAGGTGCGACCGCAAAAAGGCATGCTAGCGCTGCGGTGGAAAACACGCGGCAAGAGACTGTCCCCGCCCCCCGGAAGAACCTGCATTAACTGCGGGGGGCCGCACCCGGCAAACCACTCAGCCTGCCCCCGgtttcaacaaacaaacaacgtGAAAAACAAACGATACAGTCATTATACCTGGATATACAACGCAAAAATTCAACGCGCCAGAGGATTACGTACGAAGAGGACTACAGATCGTGACCGGAAGATCGATAGTGCACTTTCCCATCCTGAATCAAAACTCCCAGTAGTTCCAATCGCTGGCCACGGACTTACAACATAG
Protein Sequence
MARYKSKGLRGNWSEALMKLALTAVKSGKMKAYTAAKLYNVPRRTLRRYLQQKIETKSALGRKPLLNPDQEKILASRVIRLCNVGYPLTQRVLRRCVKTFCDQNNISASGGELMVGRDWLRGFLKRHRNISRRKAQNLNRARAQKLNKAVVSDYFAKLKKVLDDNEIMNKPKRIFYIDEKGCQLNLHKSPEVLAERGSKRVHLVAPEHGESVTIVSCGNALGHLIPPMILFKGKRMKPEWQGYQKKHTLPAYQHTYNPTIPGTSENQENNDPNDSDATNASENLFTSQENEDPNNINAIATSGNQVIPSDNASENNLQHLIQVDKSNFTEAQPSFSDDSDSSDDIYLSLLKQHKNNKDLRTEPNICSTTLNESYLSFCAILKTPEKISSPKVKPRAKAINNLAQELTKSMFKEKNNMPGPSQVSSQKRKQCFEINNSKAVTTKDSKQKATVNSNRADLPLVVKYAKQKINLARGEFRWRTKNNVAFVMWQDTKLVTLLTTAFHPKVNKTFCDRTQKDGMKRAFLCPSTVLQYTERMGGVDRFDQKRITYEVGRRSKRWWLRIFYFCVDLAITNSFLLYSSNTRVHNPLSHLHFRLCLARGLISNSSTIFIKEKKSGQAATILRKTAKDLHKQTKRRLTELEATTTISWFSYALENEKNRKITIRELPVFTPLEDIIQVLAEQALPPKYPKPNTGHLQYHVITRYAWSENRSLERKARPGTMPQVTSLPPSNSQVRPQKGMLALRWKTRGKRLSPPPGRTCINCGGPHPANHSACPRFQQTNNVKNKRYSHYTWIYNAKIQRARGLRTKRTTDRDRKIDSALSHPESKLPVVPIAGHGLTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-