Nsyl033450.1
Basic Information
- Insect
- Napeogenes sylphis
- Gene Symbol
- -
- Assembly
- GCA_959347405.1
- Location
- OY365786.1:9904281-9905003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-10 2.8e-07 31.5 0.0 1 42 15 55 15 57 0.95
Sequence Information
- Coding Sequence
- ATGCCTCGTAATTATATAAGGAAAACAAACCGCGGGTTGTGGTCGGAAGAGTCGATGCTCAAAGCGCTGGATGCTGTTCAAAACGGCATGCCATTTAGAACAGCAAGTAAGCAGTTTGGAGTGCCTATAATGTCATTGAAGAGGCGAACTAAAGGCAAAAACAAAGTGGCTGTCggtgcaataaaatatttaggtggaaaaaaaacagtttttacgGCAGGACAGGAAATTGAGCTCGTGCAGCACATTAAAGATATGGAGACGAGAATGTATGGATTAACACGACAAGATGTTGTATCGTTAGCATATCAACTtgctgtaaaaaataatatcgccCATCCTTTCCAGAACGAAAAAGCAGGATATGATTGGCTAAGAGGATTCCGTCAACGGCATCCAGATATAGCGCTTCGGGCGCCTGAATCCACTTCAACTGCTCGAGCACGGGCCTTTAATAAACCAGTGGTAGATAAGTTTTATGCCACATTAAAATGTGTTCAAGAGGTGAAAAACCATCCATCCCACCGTATCTACAACGTTGACGAGACTAGCATTTCTACAGTGCCTACCAAAAATACAAAGGTGTTTGCAACAACTGGACGTAAACAAGTAGCACGAGTTACATCAGCTGAAAGGGGGGAGACTACAACAGCTGTAATTTGTATGTCTGCTTCTGGAGCCTATACGACTGATATCTGTGATGATTGtttcaaagaaatttaa
- Protein Sequence
- MPRNYIRKTNRGLWSEESMLKALDAVQNGMPFRTASKQFGVPIMSLKRRTKGKNKVAVGAIKYLGGKKTVFTAGQEIELVQHIKDMETRMYGLTRQDVVSLAYQLAVKNNIAHPFQNEKAGYDWLRGFRQRHPDIALRAPESTSTARARAFNKPVVDKFYATLKCVQEVKNHPSHRIYNVDETSISTVPTKNTKVFATTGRKQVARVTSAERGETTTAVICMSASGAYTTDICDDCFKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039746; iTF_01034491;
- 90% Identity
- iTF_01094842;
- 80% Identity
- -