Nsyl030895.1
Basic Information
- Insect
- Napeogenes sylphis
- Gene Symbol
- -
- Assembly
- GCA_959347405.1
- Location
- OY365785.1:14374970-14377256[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 6.4e-07 30.4 0.1 2 38 14 50 13 57 0.89 2 2 1.2 6.5e+02 1.5 0.0 22 38 325 342 320 343 0.83
Sequence Information
- Coding Sequence
- ATGGAATCAACCGATAAGAAAACACGTGGTAAATGGACTGAGAGACAGCTTAAATCAGCTATTGAATCGGTCAAAAGCAAGCAAATGTCAAAACGACAAGCAGCAGCAACCTTCAAAATCCCAAGAAGAACTTTACGAAACCATTTAAAATCTGTCATCGAGGAAAAGAGCATTGGACGAAAAACTGTACTAACTAAAGACCAAGAAAAAGGTTTAGCAAAACGAATAATACGACTGGCTCAAGTAGGAGTGCCGTTGACCCGCAAGATTGTTAGAAAACAAGCCTACTTATTTTGTAAAGCCCATGATATAACAAATACCTTCAATGACACAAAATGCATAGCTGGCAGAAAATGGCTGAACAATTTTTTGAAGAGAAACCCCGAAATTTCTATTCGCAAAGCACAGTTTATGAACCCTGCAAGGGCTCAGAAATTGAACAAGCACATTGTGCATCTGCATTTTCAAGCAGTAAAAAAACTGTATGATGATTTAGACATTCCCCAACATCCAGAAAGATTATACAATATCGACGAGAAAGGATGTCGATTAACGTTGCACCACCAGCAACAAGTTCTTGCACAAAAGGGAAGCAAAAGAGTACATTTCCTAGCAAATGAACATGCTGAAAACGTCACAATCGCAATGTGTGTTAACGCTTCTGGTAATTCAGTTCCacctatgattttatttaaaggaaAAAGACTACGCCCAGAATTTAACGATAATTTGCCTGATGGCACTCTTGTCAAGATGTACACCAAAAGGGTATGGCCTAAGTCTATAACCCCAGAAAATATAAAGAACGGGTTTAGAGCAACTGGACTTCATCCTTACAATCCGAGTGCAATTCCCATAGAGGCATTTGCACCTTCTATCCTCTCAGAACGGCCTCCTATGCACGAGACAGCTCAGCAACAAAACAGCTCTGACACGAATTGTGAAGAAAATGATTGCACATCGCCGTCTTTATTAGCTGAAGATCATGATGTACCTTACTGTACCTTTGAGTCACAAAGATTACAGCCTTTGGCTCTATCTTTGCTTGAATGTTCATCTCCACCTCCATTAAATCTGCAGTCAAAAAATCAAACGTCAACTAATGCAGTTAAGAAATTGGTTGACTACAGTTCTTCCTGTGAATCTGATGCTGAAGATATAGAACAATCAGAGATTATTTGCGATAGGGAACGACAATATCGTTCTCCTATTCCAAGCACGTCTGGACTAGGACACCATTTACAACGAAGACCAGTAATTCATTCGTCTTCATCAGATGCACATGATGAAActattattgatataaacaGATTGCTTCTGCAATTCCCACCCACACCACCCATTCAAAAATTTGCTTATTACCATAAGATTTATACGTCATCAGAATCAGAATCAGAAGATAAAGGAGTGGAACCACCTCGAATAGAGCCGGATCGAATAGAGACTTGGGACATCGAACAAGACGATCGTGATTCCGATGATTCTGATAATGTGccattatcaaatttaaaacgAAGCATTAATCAGAAAAGACAAAAGAGGTCTCCGTTTCACGAATTCATACCGACACCTAACTTTGCAACAGTCAAAAGTAAACCAAGGCGAAaagcaattaattatattgGTCAAAAAGTAACCAAAGATCTGTTTAATGCTGTTCAAGAAAAGAAATCAAAAATAGCAAAACCGAAGACAAAACATACCGAAGATAACAGCCGAAGAAATAACCTAAGAAACAAAAATGATAATGGAGGTGGAGACGCAGATAAAAAGAGGGTTAAAGTAAAAAGAGCATTTGTTAACAAAAGAGGTACTAGGCCAAAAGAAAACCAGACCGAAACATGGTATTGCCGAGCTTGTAAAGTTGAACGAGTCGCAGATATGCGGCAATGCTTTATTTGTTCTTTGTGGTACCACGAAGAATGTGTTGGGCTAACGAAGAATGACGTAGAAGAGTTTTTATGCCCAGATTGTAACTAA
- Protein Sequence
- MESTDKKTRGKWTERQLKSAIESVKSKQMSKRQAAATFKIPRRTLRNHLKSVIEEKSIGRKTVLTKDQEKGLAKRIIRLAQVGVPLTRKIVRKQAYLFCKAHDITNTFNDTKCIAGRKWLNNFLKRNPEISIRKAQFMNPARAQKLNKHIVHLHFQAVKKLYDDLDIPQHPERLYNIDEKGCRLTLHHQQQVLAQKGSKRVHFLANEHAENVTIAMCVNASGNSVPPMILFKGKRLRPEFNDNLPDGTLVKMYTKRVWPKSITPENIKNGFRATGLHPYNPSAIPIEAFAPSILSERPPMHETAQQQNSSDTNCEENDCTSPSLLAEDHDVPYCTFESQRLQPLALSLLECSSPPPLNLQSKNQTSTNAVKKLVDYSSSCESDAEDIEQSEIICDRERQYRSPIPSTSGLGHHLQRRPVIHSSSSDAHDETIIDINRLLLQFPPTPPIQKFAYYHKIYTSSESESEDKGVEPPRIEPDRIETWDIEQDDRDSDDSDNVPLSNLKRSINQKRQKRSPFHEFIPTPNFATVKSKPRRKAINYIGQKVTKDLFNAVQEKKSKIAKPKTKHTEDNSRRNNLRNKNDNGGGDADKKRVKVKRAFVNKRGTRPKENQTETWYCRACKVERVADMRQCFICSLWYHEECVGLTKNDVEEFLCPDCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -