Nsyl030058.1
Basic Information
- Insect
- Napeogenes sylphis
- Gene Symbol
- lov
- Assembly
- GCA_959347405.1
- Location
- OY365785.1:3997224-4012001[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-18 5.5e-15 56.2 0.0 1 44 302 345 302 346 0.96
Sequence Information
- Coding Sequence
- ATGGACGACAAGCAGACCTCCGGCGAGGAGCACTACAGCCTGCGCTGGAACAACCACCAGGCGCACCTGCTCCGCTCCTTCGAGGCACTACTGCACGCGGAGACGCTCGTCGACGTCACGCTCGTATGCGCCGAAAGACGAGTTCGCGCCCACAAAGTGTTGCTCGGAGCCTGCAGCCCGCTCTTCCGGCGGATATTCAGCGAGAACCCGTGTAAACATCCGGTGATCGTGCTCAAAGACTTTCAAGGATGGGAGGTGCAAGCGGTTGTGGACTTTATGTACCGCGGGGAGGTGTCGGTGGCTCAGGAACAGCTGGAGACAGTGATCCGAGCGGGGGAATCACTACAAGTGCGAGGGCTAGCCGACCAGGAGGCTGCGGAGTGCGCGGAGTCCGAGCGCTCCCCGGCGGGCAGCCCACCGACGGGTCCAGCAGCAGCATCGCCACCCGCGAGTCCGCACAGCCCGCAGCCTCGCCGCAAGCAGGCCCGACCCAGACGCCGCTCCGGCGAATCCGACACTCCAGAAAATCTGTCCATGAGGCGTTCGCCCGGCGGCCTGAAGGCGGTTCGCCTGGCGCGCGGGCGCTCCCCGCACAAACAGGAGCCCGACGAACCGGAGACGGAGGCGCCGCCGCCGCCCAGGATGTTCCAGCCGCACCAGGACATGTTTCCCCCGGTACCGCCGCCGGCCGTATCTGCACTATCTCTCACACCACCTCACATGTTCGGTATGGAGTCACCCCTGGGTTTGTTCCCGCCGGGTCTAGAACACAAGATGTATCCTCTTATGGATGTGGAACACCGCGCGCCGCCGCTCGATGCGCAACTCTTCACCAATGTCAAGaagaaatGGAGACCGAAGGGCCAACACAGTGCACCGCGCGGAGGACCCCCCCGTTCCTGGACAAACGCAGAGCTGACGGAAGCTCTCCAACACGTATGGAACAAAAAAATGACCACAAGCCAAGCATCAAGAATATTCGGTATCCCGTACAACTCGCTGTTAATGTACGTGCGGGGTAAATACGGGAAGAGCCTAAAACTGGAGCAATTGCGGAAAGACTGTATCGGAGGACCGCTGGAGGTCTTGAACCTGAACTCcggcaacaacaacaacaaccacCCCAGCAAGCACCACGATAAGGACGACGGGCACGGCCAGCGGCCTGCCAGCTCGGAGCCCGACATCTCGTCCGGCGGGATGTTCAACCCCTTCCAACAAGGGTTCTACCCGGAATTCCCCCCGGGCTTCCCGATGCCGCTCAACATGCTGCACCTGCTGCCGCCCAGCGACAAGGCGAGGGAGCTGTACCAGTCGATGCCGATGGCCCTGGACTCGCTGTCCGCGGTGGCCAAGGAGGAGGACTGCAAGAGCGACCGCTCCAAGGAGAACTCAGCGGACGAGGAGGGTGAGTCGTACCGCCCGCGCGCCCCGCACCCCGCGCCGCCCGCGCTGCTGCACCACAACGGACAGGACTAG
- Protein Sequence
- MDDKQTSGEEHYSLRWNNHQAHLLRSFEALLHAETLVDVTLVCAERRVRAHKVLLGACSPLFRRIFSENPCKHPVIVLKDFQGWEVQAVVDFMYRGEVSVAQEQLETVIRAGESLQVRGLADQEAAECAESERSPAGSPPTGPAAASPPASPHSPQPRRKQARPRRRSGESDTPENLSMRRSPGGLKAVRLARGRSPHKQEPDEPETEAPPPPRMFQPHQDMFPPVPPPAVSALSLTPPHMFGMESPLGLFPPGLEHKMYPLMDVEHRAPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLEVLNLNSGNNNNNHPSKHHDKDDGHGQRPASSEPDISSGGMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSDKARELYQSMPMALDSLSAVAKEEDCKSDRSKENSADEEGESYRPRAPHPAPPALLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784544;
- 90% Identity
- iTF_00461702;
- 80% Identity
- iTF_01034731;