Nina001809.1
Basic Information
- Insect
- Napeogenes inachia
- Gene Symbol
- GATA-B
- Assembly
- GCA_959347355.1
- Location
- OY365791.1:19090802-19098298[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1 1.4e+04 -3.4 0.1 8 12 87 91 87 94 0.87 2 3 3.7e-15 1e-11 45.1 4.3 1 34 308 340 308 342 0.97 3 3 2.3e-17 6.5e-14 52.1 3.0 1 35 375 408 375 409 0.98
Sequence Information
- Coding Sequence
- ATGCAAGCGGGACGAGGGCGCCGCGACGTGGTGCCCGGGAGGAGAGGAAAGGGGGGAGGGGAGGGGGGGGCTAGCAACGATAACATGAACTACCGAAACTTGACGTTCCAGGTCATTAGACGTGTGCTACTTGTCTTTAAtgacataaaaatacaattgagGGGAGGAGGAGGAACAGGAAGAGGCACCAACTCCGTGTACGGCCGCTGCTCTTACCCCTCCGCCGGCTCGCCCTACTTCACCGGAGACAACATCCCACAGACGCCATTATGGACTGGCGCAGGGGGCTCCCCTAACTACGGGTCGGGTGCGGTGCTGGAAGAGTACAGCGATGCGGGCGAGGGTGAGGCGAGCGGCGGTGCGCTGCCTGCCTTCAGCCGCTTCGGCCCTTCCTTCGCCACGGTATCCCGGCCTTCCATCGTGTACGGCGCCAGCACTCTCGGTTCCAACGCGTATGCACAAACTGAAATGTGGAGTCTAAATGGTCGACAGCATCTCTCGGCCGCCGCCAGTCTCTCTGCGATCTTCATTTCCCACAGGATATTCGATATCTCGGATACAAACAGCCATGGACATTACACTATCTGCACACATGGCTGTCCTCTCGACATTACGTCTAAAtgTCACGAGCGGGTCACGAGGCACGTGCGGCCTTGTGTCCCCTCCCCCCCTCCCCCTGGCGACTTGACGACTCAGCGCCTTCCGCGCCCTGACTCACCTTGCGAGTTGCTGGCCATTGTCAAGGCTGATGAGCATGTTGAACTTGTTCTCTTAAAAATTCACATGCCCATCGGAAAATGTAAGTCGGACGCTCGGAGCTGTCGGAATCGCGAGAAGGGTCACGGGGCGAGTCAGGCGGCAGGCGACTGGTGTGAGCTAATGGTGTGTTGCGCAGTCGAAATAGCGAATGTCGGCCGCGAGTGCGTGAATTGCGGCGCCATCGACACGCCGCTGTGGCGCCGGGACTGCACCGGCCACTTCCTGTGCAACGCGTGCGGCCTCTACACCAAGATGAACGGCATCAACCGGCCGCTGAAGCAACCGCGGCGGCTGGTACGTCAGCGGCACGCGGCACACGCGCTGGCGCCCGCTCCCGACATGGGTACTAAACGGCAGGGAGTATGCTCCAACTGCGAGACCACCATCACGACCCTGTGGCGTCGCAACCTGGTCGGGGAGAACGTGTGCAACGCGTGCGGGCTCTACTTCAAGCTACACGGCGTCAACCGCCCCAAAAACATGAAAAAGGACTCCATACAGACGAGAAAACGAAAATCTAAAAACAATTCGAAAACGGAGCGCAGCATAAATAAAAACACCGTCCGGGCGACCCTCAACGTCGGCGCCACGGAACTGGAAAACATGCTGGACATGGGCGTCGCGGGCGGCAGCGGCAACGCGGGCGGCGCGGCGGGTGGCGTCCGCGGTGCTCGCTCGCTCGGCTACTACGTGTCTCCGCACGCTGTCAAGCTGGAGGAGCCGGCGCACGCGCACACGCAGCCCTACTATGAGGACGAGTACCGGCGCCCCGAGCCACAGCAGCGCCTCGAGCGCTCCGCCGTGGTGACGAACGGCAGCTGA
- Protein Sequence
- MQAGRGRRDVVPGRRGKGGGEGGASNDNMNYRNLTFQVIRRVLLVFNDIKIQLRGGGGTGRGTNSVYGRCSYPSAGSPYFTGDNIPQTPLWTGAGGSPNYGSGAVLEEYSDAGEGEASGGALPAFSRFGPSFATVSRPSIVYGASTLGSNAYAQTEMWSLNGRQHLSAAASLSAIFISHRIFDISDTNSHGHYTICTHGCPLDITSKCHERVTRHVRPCVPSPPPPGDLTTQRLPRPDSPCELLAIVKADEHVELVLLKIHMPIGKCKSDARSCRNREKGHGASQAAGDWCELMVCCAVEIANVGRECVNCGAIDTPLWRRDCTGHFLCNACGLYTKMNGINRPLKQPRRLVRQRHAAHALAPAPDMGTKRQGVCSNCETTITTLWRRNLVGENVCNACGLYFKLHGVNRPKNMKKDSIQTRKRKSKNNSKTERSINKNTVRATLNVGATELENMLDMGVAGGSGNAGGAAGGVRGARSLGYYVSPHAVKLEEPAHAHTQPYYEDEYRRPEPQQRLERSAVVTNGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01035123;
- 90% Identity
- iTF_01035123;
- 80% Identity
- -