Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365792.1:20407418-20411293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.011 1.2 10.7 3.5 1 19 383 401 383 406 0.90

2 7 0.00039 0.042 15.2 4.3 1 23 420 442 420 442 0.96

3 7 0.00016 0.017 16.4 3.1 1 23 448 470 448 470 0.98

4 7 6e-06 0.00063 20.9 2.1 1 23 483 505 483 505 0.97

5 7 0.0097 1 10.8 4.7 1 23 511 533 511 533 0.97

6 7 3.2e-06 0.00034 21.8 3.1 1 23 539 561 539 561 0.99

7 7 0.00088 0.093 14.1 1.0 1 20 567 586 567 587 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.011	1.2	10.7	3.5	1	19	383	401	383	406	0.90
2	7	0.00039	0.042	15.2	4.3	1	23	420	442	420	442	0.96
3	7	0.00016	0.017	16.4	3.1	1	23	448	470	448	470	0.98
4	7	6e-06	0.00063	20.9	2.1	1	23	483	505	483	505	0.97
5	7	0.0097	1	10.8	4.7	1	23	511	533	511	533	0.97
6	7	3.2e-06	0.00034	21.8	3.1	1	23	539	561	539	561	0.99
7	7	0.00088	0.093	14.1	1.0	1	20	567	586	567	587	0.95

Sequence Information

Coding Sequence: atGGATGGCTTTTGCAGAGCTTGCTTATCAAGAGATGAAGAACAAAcagaattattacaatatagtgAGAAAAATAGGAGATTATTTGTATATTCCACTGGATTACAGGTAAAACGAAATGATGCCTTTACATTTCAGCTTTGTAAGGAATGTTACATAAATATGAAAGGTGCATGCAACTTTAAAAAGACTTGCAGGAATTcggataaaaaaattaaaaactactctgccATCAAAGATAGTGGAGAAAATGTTGATatctattctttttttaaacagaatGACGATTCCTTAAAACTAAGgctTCCATTAAACATAGGTAGTAGCACACCACACAACTTAAAAGATGAAGACAATGAGTCTACATGTACAAGTATCCAAAACTTTATGACGGACATACTACAAGAGATACCTGACTCTGAGGTCCACATCATTAGGCAGGTTATAGAAGAAGAGGCAGATATATTGGAGGACTCGCTGGAATCACACTGGCTACAAGAGGATGTATCTATGGATAGTGAGTTTAAAATGGATTTTAGtttcAGCCCATTTTCCACATCCCGTTCCACACAGAATGTTAAAGATGTGAAGAATTTGTCTCCAATTAAATCAAACAACCAACACGAAGGAACAAACAAACCAACTGACATTCACAAATCTATCTTAGATAACATAATTCcaaatgaaatagaaaacaaCTTTGATTCGttagacaaaataataaattataagagcAAGGAAAATAAATGTGCTATTGacattaatttagaaaatgcattgaaaaataatacagCTCAGAAAGTAATGTTGGATGATTTGCTAGCTTCACCACCAGtcatacaaaatataacatcaccATCAAcacctttaataaaaaagattttgtttGGAGATCTTAAAGATGAATCATCACATAGTAATACAACAAAAATTATAAGCAATaccaaggaaataaaaaaaaatgatgaaataaatgaaaatatggaGGCACTAGACGAATTTCTGAACACAAATATTCTGGATGAAGATGATCCTGGTAGATATAATGATATAGACAAAATAGATACCTATCTGCCAAGACCCGAAATAAAATCCAAGGTACTGGAAAATATGTCACcagcaaaaaataaatactgcaTAACTAATTTCTACTGCAAAATGTGTGACCGTAAATTCAAAAATGTGGTCGCCTTGAAAATACATTGCACCAGATATCATAAGCTTAAGATTCCAAAACAAAGAAGTCAGGCAACTAAGTTTATTTGTGATTATTGTGGGAAATGTTTTAATTCTTCTCGTTGTATTGTTAAACATATTGAAAATCATAAGaatCCAGTAAAATTTGAATGTAAAAGGTGTTCCTTGAAATTTAATACGAAAACTGCATTACGACAACATCAAACTACCCACAGCCATAAAGCAATGAACAATAATGTTACAAAGAACCATGTATGCTCCATCTGCGGCTGGGCCTGTACtagtaattcaaattataacatacatataaaacgaCATTTCAAGATATACATGCATTCTTGTAAGGAGTGTGGTCAAGGGTTTTACAGAAAATGTGATATGGATGCACATAATAGAAAACATACGGGCGAGCGTCCATACCAATGCGACTTTTGTTCCAAAAGCTTCGCGCGTCACGACGCACTCACGAGACACGTTAAACGACATACAgaTGAAAGACCCTTTCCGTGCAACTTCTGTAAAGCTGCGTTCACAAATGCCTATGATTTAAAGCATCATAAAGAATTTACTAAAACCTGTTTAAAAGTCCAGAGGGAGTTAGCAGAAAAGACTGATCTAacagataattttatattgaaagaaAATGTTCTGTGA
Protein Sequence: MDGFCRACLSRDEEQTELLQYSEKNRRLFVYSTGLQVKRNDAFTFQLCKECYINMKGACNFKKTCRNSDKKIKNYSAIKDSGENVDIYSFFKQNDDSLKLRLPLNIGSSTPHNLKDEDNESTCTSIQNFMTDILQEIPDSEVHIIRQVIEEEADILEDSLESHWLQEDVSMDSEFKMDFSFSPFSTSRSTQNVKDVKNLSPIKSNNQHEGTNKPTDIHKSILDNIIPNEIENNFDSLDKIINYKSKENKCAIDINLENALKNNTAQKVMLDDLLASPPVIQNITSPSTPLIKKILFGDLKDESSHSNTTKIISNTKEIKKNDEINENMEALDEFLNTNILDEDDPGRYNDIDKIDTYLPRPEIKSKVLENMSPAKNKYCITNFYCKMCDRKFKNVVALKIHCTRYHKLKIPKQRSQATKFICDYCGKCFNSSRCIVKHIENHKNPVKFECKRCSLKFNTKTALRQHQTTHSHKAMNNNVTKNHVCSICGWACTSNSNYNIHIKRHFKIYMHSCKECGQGFYRKCDMDAHNRKHTGERPYQCDFCSKSFARHDALTRHVKRHTDERPFPCNFCKAAFTNAYDLKHHKEFTKTCLKVQRELAEKTDLTDNFILKENVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461887;
90% Identity: iTF_00843056;
80% Identity: -