Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365802.1:1708817-1716989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.13 14 7.2 0.4 1 23 313 335 313 335 0.97

2 10 0.006 0.64 11.4 9.2 1 23 342 364 342 365 0.94

3 10 0.025 2.7 9.5 1.4 1 23 396 419 396 419 0.95

4 10 0.041 4.4 8.8 1.3 1 23 423 446 423 446 0.90

5 10 0.0058 0.62 11.5 0.1 3 21 460 478 459 483 0.93

6 10 0.096 10 7.7 1.4 2 23 532 553 531 554 0.94

7 10 0.0044 0.47 11.9 0.4 2 20 570 588 569 591 0.91

8 10 0.00017 0.018 16.3 0.4 1 23 597 619 597 619 0.98

9 10 2.9e-06 0.00031 21.9 1.4 1 23 626 648 626 648 0.97

10 10 4.2e-05 0.0045 18.2 4.1 1 23 654 677 654 677 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.13	14	7.2	0.4	1	23	313	335	313	335	0.97
2	10	0.006	0.64	11.4	9.2	1	23	342	364	342	365	0.94
3	10	0.025	2.7	9.5	1.4	1	23	396	419	396	419	0.95
4	10	0.041	4.4	8.8	1.3	1	23	423	446	423	446	0.90
5	10	0.0058	0.62	11.5	0.1	3	21	460	478	459	483	0.93
6	10	0.096	10	7.7	1.4	2	23	532	553	531	554	0.94
7	10	0.0044	0.47	11.9	0.4	2	20	570	588	569	591	0.91
8	10	0.00017	0.018	16.3	0.4	1	23	597	619	597	619	0.98
9	10	2.9e-06	0.00031	21.9	1.4	1	23	626	648	626	648	0.97
10	10	4.2e-05	0.0045	18.2	4.1	1	23	654	677	654	677	0.95

Sequence Information

Coding Sequence: atgcgtTGCTGTGTTCCTTTTTGTAaaaactctaaaaataataacaagtcCGAGGAAATAACATTCCACACTTTTCCCTCTGATGCGGAACTTAAAGATTCTTGGCTTGAAGCATTAGGCATAAACAAATGGATACCTCGTACATTTGTATGCTCTGAACACTTTAAACCTGATGATATTTGCGAAACTAAGAGTGGTGTTAAGAAAATACGTCCAGGAGTTCTACCCTTTTATATCCGTCATAAAAATGTTGatgaaattgaaaacagcaCTGCACCTCagATTTGCAGAATATGCCTGGGAACAGATACAAGGCTCTATCCGATACCGTCAAATGATCTTCAGCAAACATATGAGCTCCTTACAGGAATGATGttgTATAAAGACTGCCTGCCTCAGAACCTGTGCATGGAATGTATTTGGCGACTTCAAAATTGCAATACATTCAGAATGAAGAGTGTGCGGGCACATTCAATCATGTTAGAATTAGTTAAAAATGGCaattttACATTAGAAgcaataaaatcaaatcaagtgaatttaaaaccaaatttgATGCACAAATCATTTACACCTGACCACTGTGACCTGTACTTAACTGAAGAGGACACAATAACGAAACCAATACAGGAAATAGTGTTTGATGATGTGAAGATGGAGAAGGAGTACATCGACGAGGATGTTGAAACAAATTTCGTTGTGAAGAATTACTCAACAGACGACAGCTTGCCGTTGGAGGCTCAACGGACTAAGGTTAAGAGAGTAAAGAAGAAACGTGAAAAGAAAATCAAGGAACCGAAGATAGACAGACGCAGGAAACCGTTCCTTAATGATGACTTAAATGAGAGTCTCTTTACCATAACTGACCTCACATTTGAAGAGCAAGTTGCCGATATACAGAAGAGACAAGAGAGTTCTAACTTTAAGAATTCTGTGTTTAAATGTATGGAGTGTTTCAAAGGGTTTTTGGATGAAGGCGCTTATAATGGACATATGACTAGACATACCAATCAATGCGGTGAATACTCGTGTGAGATATGCAAGACCCACTTCAAGCACTCCCACGCGCTCCGGAAACACACCACGGCGCATCACAAACAGAGGTTCAACTGCAACCGGTGCGCCTTCCTCACCACCcacagACAGACGGCCAGACTGCACGAGAGATGGCACAAGGGAACCAAATATGAATGTCCGCATTGTAATGAAGTTTTTCTTAAATTCACAACCTACATGGGTCATATCCGGATCAAACACCCTTCAGACTTCGTGTGCGCGCTCTGCGGGTACTGCTTCGTGAGTCAGAAGGGCATTGACCTTCATAAGAAACTGAAACATAGATTACACGTGGGACAGGTGCCAGAGGACGGTCCCCTGTGTTCTGTGTGTGACGTGCGCTTCGTGTCCCCGGAGGCCTACAGGAGACACCTCAGTGTGTCCGCCAGGCACCACGACCAAATCCCAAAAGATTCATCAAAACCAAAACGCGGCAGAAAGTTTCGTGAAACAGAACAAGAGACGGACATCGATAAGATGGAACAaaacgacaaaaaaatatatccgagCCAAGTACGGAAGGCGGAGGGACCCATACCTTGTGAACagTGTGGTATGCAGCTGGAAGACTCTCGCGCATATCATGCACACTTCAGACGACACCATCCAGACAAGAACAGAACCAACTACCCCAGCATGAAGTCACCATGTATGTGCGAGGTCTGCGGACGTATGTTTCAGAGTCGCGCACTGCTCGAGGACCATCGCTGGGTGCACACCAACGAGCGGCCGTTCCCGTGCGAGGCGTGCGGTAAACGATTCCGCATGAAACAGCGACTAGTAGCACACCGCCGCGTGCACCGACCGGCCGCCGGACGATACAACTGCGCGCTCTGCGGGAAGGCGTTCAGCACGCATAGCAACCGACAGAGACACATGATAATTCACACAGGACTGAAGCCATTTAAATGCGAGATGTGTGGTAAGTGTTTCAAACACGCCAGCGAAAAGAGAGCACACATTACTTACGTACACCTCAAGAAACCCTGGCCGAAGAGAGCGCGAGCCAAGAGACAAGGACAGAACATACAGACTGTACCCAGTGCGAGCGAGATAGACATACCGTGGTGCGACCCCAAGATGGACATCATGATCGACaaacagtattttaatattaagatataa
Protein Sequence: MRCCVPFCKNSKNNNKSEEITFHTFPSDAELKDSWLEALGINKWIPRTFVCSEHFKPDDICETKSGVKKIRPGVLPFYIRHKNVDEIENSTAPQICRICLGTDTRLYPIPSNDLQQTYELLTGMMLYKDCLPQNLCMECIWRLQNCNTFRMKSVRAHSIMLELVKNGNFTLEAIKSNQVNLKPNLMHKSFTPDHCDLYLTEEDTITKPIQEIVFDDVKMEKEYIDEDVETNFVVKNYSTDDSLPLEAQRTKVKRVKKKREKKIKEPKIDRRRKPFLNDDLNESLFTITDLTFEEQVADIQKRQESSNFKNSVFKCMECFKGFLDEGAYNGHMTRHTNQCGEYSCEICKTHFKHSHALRKHTTAHHKQRFNCNRCAFLTTHRQTARLHERWHKGTKYECPHCNEVFLKFTTYMGHIRIKHPSDFVCALCGYCFVSQKGIDLHKKLKHRLHVGQVPEDGPLCSVCDVRFVSPEAYRRHLSVSARHHDQIPKDSSKPKRGRKFRETEQETDIDKMEQNDKKIYPSQVRKAEGPIPCEQCGMQLEDSRAYHAHFRRHHPDKNRTNYPSMKSPCMCEVCGRMFQSRALLEDHRWVHTNERPFPCEACGKRFRMKQRLVAHRRVHRPAAGRYNCALCGKAFSTHSNRQRHMIIHTGLKPFKCEMCGKCFKHASEKRAHITYVHLKKPWPKRARAKRQGQNIQTVPSASEIDIPWCDPKMDIMIDKQYFNIKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034658;
90% Identity: iTF_01034658;
80% Identity: iTF_01033801;