Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365803.1:16303821-16304834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.058 6.2 8.4 0.5 2 23 2 24 1 24 0.93

2 9 0.19 20 6.7 0.7 2 23 49 71 48 71 0.91

3 9 0.00063 0.067 14.5 1.0 1 23 119 142 119 142 0.95

4 9 0.022 2.4 9.7 1.2 3 21 149 167 148 168 0.93

5 9 1.4 1.5e+02 4.0 0.1 3 10 177 184 175 198 0.85

6 9 9.8e-06 0.001 20.2 0.2 1 23 205 228 205 228 0.96

7 9 0.0031 0.33 12.3 2.1 1 23 233 255 233 255 0.94

8 9 1.9e-05 0.002 19.3 0.2 1 20 261 280 261 283 0.94

9 9 3.6e-05 0.0038 18.5 2.8 1 23 289 312 289 312 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.058	6.2	8.4	0.5	2	23	2	24	1	24	0.93
2	9	0.19	20	6.7	0.7	2	23	49	71	48	71	0.91
3	9	0.00063	0.067	14.5	1.0	1	23	119	142	119	142	0.95
4	9	0.022	2.4	9.7	1.2	3	21	149	167	148	168	0.93
5	9	1.4	1.5e+02	4.0	0.1	3	10	177	184	175	198	0.85
6	9	9.8e-06	0.001	20.2	0.2	1	23	205	228	205	228	0.96
7	9	0.0031	0.33	12.3	2.1	1	23	233	255	233	255	0.94
8	9	1.9e-05	0.002	19.3	0.2	1	20	261	280	261	283	0.94
9	9	3.6e-05	0.0038	18.5	2.8	1	23	289	312	289	312	0.97

Sequence Information

Coding Sequence: ATGGTTTGTGTGTATTGCTGCGAGAGCTATGACGATCCCACCATGTATAGGAGACATATGGAAGAGGAGCATCAGACTTTTAATGTTCGTATGGCCTTTGTACACTGCAGCGAGGGCTATATTAAAGTAGATTGTACTGAACTTCGCTGTCGACTATGCACGGAACCGTTCGACACACTTGAAGATGTCGCTCAGCATTTGTTTCATAAACATGAACAACCTCTTAATCTTTCTTTCGAGCTCGGTATGCAACCATTTAAGTTAGAGAAGGATAAATTAATTTGTGCTATATGCCGTTCAAAATCACTCTGCCTTAGACAGTTAAGCAGACACACGCAAACACACTTTTTGAAATACACATGTGAGGCCTGCGGAAAATCTTATGCCACTATGACTCCTTTGAAACATCATATAACTTATTCTCATACTGGACAAGACAGGATCTGTAGGAAATGTAAAAAGACTTTTAACTCCTTAACAGAGAAACGTCAGCACTTACAAGACTCCAAGTCGTGTTGGTCACATTTATGTAATGTTTGTGGTGAGAGGTTCCTCAGTTGGACCATAAAACAAACCCATTTAACAGAGGTCCACGGCGCCCCAAAGAGGACATACGTCTGCCCGGAATGTGGGGAAGTGTTCCCggatagaaaaaaatatcgcgttcattttaaaattttgcatacagatgataattttatatgtacatgTTGCGGTCTTAAATTTGATACGAGAAGAAATTTGGAAAATCACAGAGTAGTTCATACTAAGGAGAAATTGTTCCCTTGTCCAGCGTGTTCCAAATCATTTCCAAGAAAGAAAAATTTGGTTCAACATATGTGGATTCACAGTGAATTAAAGAGGTTTAGCTGCACTTTgtgtaataaacaatttaatcagAGAGTCAGTTGGAAGACACATATGAAGTCGTACCATccagatttaattaattatgaaggAATGCAAAACAATAATGCAAAAATGGTGCTCACTGTTTTAAAGAATGACGAGTGA
Protein Sequence: MVCVYCCESYDDPTMYRRHMEEEHQTFNVRMAFVHCSEGYIKVDCTELRCRLCTEPFDTLEDVAQHLFHKHEQPLNLSFELGMQPFKLEKDKLICAICRSKSLCLRQLSRHTQTHFLKYTCEACGKSYATMTPLKHHITYSHTGQDRICRKCKKTFNSLTEKRQHLQDSKSCWSHLCNVCGERFLSWTIKQTHLTEVHGAPKRTYVCPECGEVFPDRKKYRVHFKILHTDDNFICTCCGLKFDTRRNLENHRVVHTKEKLFPCPACSKSFPRKKNLVQHMWIHSELKRFSCTLCNKQFNQRVSWKTHMKSYHPDLINYEGMQNNNAKMVLTVLKNDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782979;
90% Identity: iTF_00958921;
80% Identity: iTF_01034976;