Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365802.1:2166021-2175925[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00035 0.037 15.4 0.9 1 23 161 183 161 183 0.98

2 11 0.005 0.53 11.7 2.3 1 23 190 212 190 212 0.98

3 11 2.6 2.8e+02 3.1 0.3 1 8 216 223 216 239 0.79

4 11 0.0015 0.15 13.4 2.7 1 23 246 268 246 268 0.98

5 11 8.8e-05 0.0093 17.2 0.9 2 23 275 296 274 296 0.97

6 11 7.3e-05 0.0077 17.5 1.8 1 23 302 325 302 325 0.97

7 11 7.7e-05 0.0081 17.4 0.6 1 22 330 351 330 355 0.93

8 11 0.0012 0.13 13.6 0.5 1 23 363 386 363 386 0.94

9 11 0.017 1.8 10.0 0.6 3 23 394 415 393 415 0.96

10 11 2.1e-07 2.2e-05 25.5 0.1 2 23 423 444 422 444 0.97

11 11 0.037 3.9 9.0 0.1 5 21 453 469 450 472 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00035	0.037	15.4	0.9	1	23	161	183	161	183	0.98
2	11	0.005	0.53	11.7	2.3	1	23	190	212	190	212	0.98
3	11	2.6	2.8e+02	3.1	0.3	1	8	216	223	216	239	0.79
4	11	0.0015	0.15	13.4	2.7	1	23	246	268	246	268	0.98
5	11	8.8e-05	0.0093	17.2	0.9	2	23	275	296	274	296	0.97
6	11	7.3e-05	0.0077	17.5	1.8	1	23	302	325	302	325	0.97
7	11	7.7e-05	0.0081	17.4	0.6	1	22	330	351	330	355	0.93
8	11	0.0012	0.13	13.6	0.5	1	23	363	386	363	386	0.94
9	11	0.017	1.8	10.0	0.6	3	23	394	415	393	415	0.96
10	11	2.1e-07	2.2e-05	25.5	0.1	2	23	423	444	422	444	0.97
11	11	0.037	3.9	9.0	0.1	5	21	453	469	450	472	0.87

Sequence Information

Coding Sequence: ATGATGTTGGAAATATGCCAAGCTTGTTTAAAAACCGGAGACAATGTTCACCCGATGACCGCTGAAgatgtgaaaaaatattgttttgttacaaATgatGTTAAATTACCTTTCAAAGTGCAACTTTCCACTTCAGACACAAAATACTACTATGTCGGCCCAGACGAGATCATAGCCAGTGTGAAGGAAGAAGATGTTACAAAGGAGGATGAGGATGACATACCTTTAGTCTTCTTAAGTGAAAACTGTGAATATGAAGATAATTATGTTGAGgATGAAGAAGACATTAAATCAGAAATCAAAGAAGGATTTGAGGACAGTCACACAAagaacaaaaagaaaaagaaagatataaaagaagGTTTCACTTCCAGGATGGTGACGGAGACTGAAGAATATATTGTTATCAAATTAAGCAAGGACCAGattttggaTGAAATGCAGCAACATTCacaaactgaaaaatataaagtgtTGCCATTTAAATGTGAAAAATGTGTGCGAGGATTTAATTTCGAAGATGTTTTACAAAAACACATGGAGAAGCATAGCTCTAATAACGGACCGTTTCAATGCGAGCTGTGCACTCAATATTGTCCAACAAAAGTTTCTCTGAGAGGACATTTGAAATCGCATTCAACAaggtATAAATGCAAGCTATGCGGTATCATCCGTCTCTCTCGACAACACATACTGGAGCATTACTCATTAGAGCACACGCACACAGCCGCACTATATAAATGTCCACAGTGTGAGCACACAACCAATAAACGGACGGCCATGCAGCGACACGTCAGACTACACGCAACCAGCGAACCGCTGAAGTGCGATCTGTGCAGCAAACTGTATAAGAGCAAAGAGTCGCTTAGAGTTCATATTATgcGCCACGATGATAAGAAGCTCCACCAGTGCGAGCTATGTACCAGTACTTTCGTGTACGCGACTCAGTTACGCAAACATATACGTTCCGTTcatgaaaataatgaatattattgcGTGGAGTGCGACATTATGTTCAAATCTATGgataatttaaaacaacatttacaAAGAGCAAAACGACATCGAGACTCGTCTTCATACaaGTACACGTGCCCGCAATGCCCGGACAAGTTCATATCCCCGTCGACGCTGGCGACGCACCGCACGCACGCGCACGGCGCGGCGAAGAGCGAGTCGTGCGGCGTGTGCGCGCGGCGCTACAGCAGCGGGGAGGCGCTGCGGTGGCACGTGCGGCGCTGCCACGCGCCCGCGCAGCCCCGCCTGCCGTGCCCGCTGTGCGGGAGAATGTTCTCACGCGCGTACGTACTTCGTGTACACATGCGCACACACACAGGCGAGCGGCCTCATACGTGTGAGTGTGGCGCCGCCTTCACTCAACCCGCGGGTTTGAGAGCACATGTCGTAGCCAGACATAagCTCAGTTGTCAAGCCAGTCACAGTATACCAGAGATCACAGGAACAATTCCAATTTCAGCTAACAATCTGAACTAA
Protein Sequence: MMLEICQACLKTGDNVHPMTAEDVKKYCFVTNDVKLPFKVQLSTSDTKYYYVGPDEIIASVKEEDVTKEDEDDIPLVFLSENCEYEDNYVEDEEDIKSEIKEGFEDSHTKNKKKKKDIKEGFTSRMVTETEEYIVIKLSKDQILDEMQQHSQTEKYKVLPFKCEKCVRGFNFEDVLQKHMEKHSSNNGPFQCELCTQYCPTKVSLRGHLKSHSTRYKCKLCGIIRLSRQHILEHYSLEHTHTAALYKCPQCEHTTNKRTAMQRHVRLHATSEPLKCDLCSKLYKSKESLRVHIMRHDDKKLHQCELCTSTFVYATQLRKHIRSVHENNEYYCVECDIMFKSMDNLKQHLQRAKRHRDSSSYKYTCPQCPDKFISPSTLATHRTHAHGAAKSESCGVCARRYSSGEALRWHVRRCHAPAQPRLPCPLCGRMFSRAYVLRVHMRTHTGERPHTCECGAAFTQPAGLRAHVVARHKLSCQASHSIPEITGTIPISANNLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034881;
90% Identity: iTF_01034881;
80% Identity: -