Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365797.1:13833326-13838428[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00038 0.04 15.2 0.2 2 23 135 156 134 156 0.93

2 10 0.00053 0.056 14.8 3.3 1 23 162 184 162 184 0.97

3 10 6.3e-05 0.0067 17.7 0.3 1 23 287 309 287 309 0.98

4 10 0.00095 0.1 14.0 0.0 3 23 388 409 386 409 0.90

5 10 0.00099 0.11 13.9 0.5 1 23 425 447 425 447 0.96

6 10 3e-05 0.0031 18.7 0.2 1 23 473 495 473 495 0.98

7 10 0.00059 0.063 14.6 0.2 1 23 501 523 501 523 0.97

8 10 0.00033 0.035 15.4 0.3 1 23 529 551 529 552 0.95

9 10 0.008 0.85 11.1 0.6 1 23 565 587 565 587 0.96

10 10 0.0079 0.84 11.1 0.1 1 20 743 762 743 765 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00038	0.04	15.2	0.2	2	23	135	156	134	156	0.93
2	10	0.00053	0.056	14.8	3.3	1	23	162	184	162	184	0.97
3	10	6.3e-05	0.0067	17.7	0.3	1	23	287	309	287	309	0.98
4	10	0.00095	0.1	14.0	0.0	3	23	388	409	386	409	0.90
5	10	0.00099	0.11	13.9	0.5	1	23	425	447	425	447	0.96
6	10	3e-05	0.0031	18.7	0.2	1	23	473	495	473	495	0.98
7	10	0.00059	0.063	14.6	0.2	1	23	501	523	501	523	0.97
8	10	0.00033	0.035	15.4	0.3	1	23	529	551	529	552	0.95
9	10	0.008	0.85	11.1	0.6	1	23	565	587	565	587	0.96
10	10	0.0079	0.84	11.1	0.1	1	20	743	762	743	765	0.93

Sequence Information

Coding Sequence: ATGGAGGAGGAAGAATTTAGTTTGCAATGGGAAGATGATAagCAAAATATAGTAACTACTGAAGAAGTAATATGTGGACTGGATAGTGTACAAAATGAATCATTTGAAAATATGACAGAAGAAATTATTGCTGATACAGATCAAATGGCAGCAGAGAACTTAATGTTCTTATCACAGGATGTTGTTAGTTACACTGAAAGTGCAGATTTAGCTGTGGATCCAAATGTTGAGTGTGTTACTGAAGAAGTCATCACAGACGACTGGGTTATAACTGGAGGACAAGAACGGGTGGAAGTGCCTTTAGAACATTTAGCAAACCCTGAGCAAAATGTGAAAATTGAAAACGACATTGATGTTCCTTTACCAACTGATCAGgATGAATACACTGCCATGAGGCCATGGCCCTGCGACTTCTGTTCACGTCGATTCCGTAAGAAGGCAGCGTTGATGAATCACATGGTAGCGCATCAGAACGACCGACCACACTCATGCAACCTGTGCGGTGTGCGGTACGTGAGGAAGTGTGACCTCATGAACCATCTCAAAGTACACGCCTTTGTACCTGATAACACAGAACCTATGGACTATGaTGACGTCATAAGTTCTAATCCagttattaaaacaaagaaaaaacgaGGTCGACGAAAAAAGAAGCCCGAACCTGTTGagAATGGTGTGTGGGAGAACATGACGTCGGCTCGTACGCAGCAATGGTCCCGTCGCGCACGTTCGCCCCAGGCACCCGCGCCCCCTCCCCCCGCGCCGCTGTCCCCTCCCACACCCTCCCCGCAGTCCGCGCCATCTCCACCTCCGTCGCCCTCCCCGCCCACCCCTCCGCCGGCCGACCCGTCGCGCCCCTTCGTGTGCCGGCACTGCGGGGTCGGGTTTGCCAGGGAGAAGGCCCTGCAGTCACACGCGAGGGTGCACGGCGGTGACTCGCCCGTCGAGTGTGCGTCGTGCGGCGAGCTGTGCTGGTCGCGGGAGGCGCTGCGTTCGCACGCGGCGGCGCGACACCCGCACGCAGCTGGAGCACCCGCCGACCTTTACGACGACTCCGACTCGGGTGACGATATGGAGTTCCGTCCGTCCCCTGTGCCCGAGGACGAGGAGCGCTCCACTCCGCGAGACCGCGCTGGAGACGTACGAGGACCCGAGCTGTTCTGCGGAGACTGCGGCGTCGCCTTCCAGCGAGCCGACCTGCTGAGGAGGCACGTGGCCGCCGCGCACAGCTACAAGCGGCACGACAGCGGCGGCAGTGCATGGGAGAGAGAGCACACCTGTGACGTGTGCGGGGAGACCTGCACAGACGCGTTGCAGCTGTTGGCGCACGCAGAGAGACACGCGGAGCGACCCAGGAACACCAGagTCAAAAGAATGGCCCGAGGCAGAAATAACACTTCAAATAGTTCAAGACAGTTTCCATGTAGAGAATGCGGTAAAGTGTTCGGGTCGCGCAGTTCTCAACAGATCCACGTTCGAATCCACACGGGAGAGCGACCCTACGCGTGTCGATTCTGTTGGAAGGCATTCGCGGACGGTGGCACCCTCCGCAAGCATGAGCGTATACATACGGGTGAGAAGCCCTACGCCTGTGCGGTGTGTCCTCGCGCGTTCAACCAACGCGTGGTGTTAAGAGAACATGTACGCTCGCACCACTCCGCGCCCGACCGACGAGCGCACGGTGGTTATCAATATTGCTGCGTAGTGTGCGGGAAACCTCTACATTCTAGCGCAGAACTAGTTCAACATTTGATCCAACATTGTGATGAAAACACGGCATTGAAGAGACAACCTCAAAATGGCCCCCGAAAATACAAACGACGGCGAAAAATAAAAATCGAGGATTCCCCTCCGAGCCGCGACTGGCGCCGAGACACGCCGATCTCACGGTCTCCCTCCGTCGAGGGGTCGCCCTCCCCTTCGCCGACTCCTCCACGAGGCCGACCCCCCCGGGTCCCCCGCGCCGCTCCACCCATCGGACCCCCTCGACGCAAGCGACGCCGCGCTCCTCCCCCGCCGCGACCGCGCATGATACACACGGAGGAACCCCGGCCCAGAACTAAACAGATTCGTAGTAGAAGACCTCCTCGTCATCCCGCAGACGACCTACGTGCGATCGGAGCACACTCGCCGTCGCCGACACCCGCGTCTCCCTCGCCTCCTTCACCTTCCTCTCCTCCTTCTCCCATCTCCTCACCCCCCCACTTGAACACGAGCGACGGCCCCTTCAAATGTGAAATGTGCTCGCTGGAGTTCCCTCGTCGCGATGCATTGCTACTCCACGTGCCCATACACATTTGA
Protein Sequence: MEEEEFSLQWEDDKQNIVTTEEVICGLDSVQNESFENMTEEIIADTDQMAAENLMFLSQDVVSYTESADLAVDPNVECVTEEVITDDWVITGGQERVEVPLEHLANPEQNVKIENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHSCNLCGVRYVRKCDLMNHLKVHAFVPDNTEPMDYDDVISSNPVIKTKKKRGRRKKKPEPVENGVWENMTSARTQQWSRRARSPQAPAPPPPAPLSPPTPSPQSAPSPPPSPSPPTPPPADPSRPFVCRHCGVGFAREKALQSHARVHGGDSPVECASCGELCWSREALRSHAAARHPHAAGAPADLYDDSDSGDDMEFRPSPVPEDEERSTPRDRAGDVRGPELFCGDCGVAFQRADLLRRHVAAAHSYKRHDSGGSAWEREHTCDVCGETCTDALQLLAHAERHAERPRNTRVKRMARGRNNTSNSSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRAHGGYQYCCVVCGKPLHSSAELVQHLIQHCDENTALKRQPQNGPRKYKRRRKIKIEDSPPSRDWRRDTPISRSPSVEGSPSPSPTPPRGRPPRVPRAAPPIGPPRRKRRRAPPPPRPRMIHTEEPRPRTKQIRSRRPPRHPADDLRAIGAHSPSPTPASPSPPSPSSPPSPISSPPHLNTSDGPFKCEMCSLEFPRRDALLLHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419204;
90% Identity: iTF_00958871;
80% Identity: -