Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365802.1:20875310-20885237[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.16 18 6.9 0.8 1 20 6 26 6 27 0.90

2 14 0.0051 0.54 11.7 0.0 2 21 34 53 33 54 0.93

3 14 0.55 58 5.3 0.1 1 12 168 179 168 182 0.93

4 14 10 1.1e+03 1.3 0.4 1 19 271 289 271 289 0.95

5 14 4.7e-05 0.005 18.1 0.4 1 23 296 318 296 318 0.98

6 14 0.00016 0.017 16.4 2.4 1 23 332 354 332 354 0.98

7 14 8.6 9.2e+02 1.5 0.4 1 12 378 388 378 399 0.65

8 14 0.00036 0.038 15.3 0.3 3 23 407 427 405 427 0.95

9 14 0.028 2.9 9.4 1.7 1 23 443 465 443 465 0.96

10 14 1.2e-06 0.00012 23.1 4.6 1 23 471 493 471 493 0.98

11 14 0.0023 0.24 12.8 6.2 1 23 499 521 499 521 0.97

12 14 7e-06 0.00074 20.7 0.4 1 23 527 549 527 549 0.98

13 14 0.0002 0.021 16.1 0.1 1 23 553 575 553 575 0.98

14 14 0.00023 0.025 15.9 0.1 1 23 583 606 583 606 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.16	18	6.9	0.8	1	20	6	26	6	27	0.90
2	14	0.0051	0.54	11.7	0.0	2	21	34	53	33	54	0.93
3	14	0.55	58	5.3	0.1	1	12	168	179	168	182	0.93
4	14	10	1.1e+03	1.3	0.4	1	19	271	289	271	289	0.95
5	14	4.7e-05	0.005	18.1	0.4	1	23	296	318	296	318	0.98
6	14	0.00016	0.017	16.4	2.4	1	23	332	354	332	354	0.98
7	14	8.6	9.2e+02	1.5	0.4	1	12	378	388	378	399	0.65
8	14	0.00036	0.038	15.3	0.3	3	23	407	427	405	427	0.95
9	14	0.028	2.9	9.4	1.7	1	23	443	465	443	465	0.96
10	14	1.2e-06	0.00012	23.1	4.6	1	23	471	493	471	493	0.98
11	14	0.0023	0.24	12.8	6.2	1	23	499	521	499	521	0.97
12	14	7e-06	0.00074	20.7	0.4	1	23	527	549	527	549	0.98
13	14	0.0002	0.021	16.1	0.1	1	23	553	575	553	575	0.98
14	14	0.00023	0.025	15.9	0.1	1	23	583	606	583	606	0.96

Sequence Information

Coding Sequence: ATGGGAGACTTTGCATTTTATTGTCCTCTTTGCTGCAATGCTACATTTGATTCTAAGAAGTCTCTTATTGCCCATTTGACACCTATATCACTAAATTTGGTGTGTCCTGTATGCGGTATAAAGTTTTCTTCTATAGAACGGCTTGTGGAGCACATAAAAGTCGACAATTGTGACGTACAATCCGTAAACTTGGAAATTAAAGATCACGGTATTAGTGAAGAAACAAATACTGTCATATCATCTGAATCGGAAAAATCTAAAATAGAAAGTGAGGAGgtcaaatttgttaaaatagatGGCGAGAATAGATATGTGATTGTAACTGATGAAGACTCTGCCTTAAACCCCGGTATCACAATAGttactaaacaaaataatgatgGCACCATATCCTTAACCACACAGgatgcaACAAGCACAAATCCAAAAATGTTGACAGATGAATCCGATATAAACAATGAGAATCTAAAGAGTGAGGTTCAAAATAGTCAAGAAGAAAGATACAGTTGCAATACATGTGAAATGACCTTTACATCTGTGCTAGAACATATACAAAATTACCATAATGATCAAGATGTTGTGGttgagGAACCAATAGACGAAAATAGCTCTCAAGAAATAACTATGGACTTCGGGCAAAATGGTGGTGGGGATATGTTGGAAAAACAGTTGTCGCGGCGCATGATAACGGAAACTGGGGACATTGTAGAGACACCTATTAGTGAAGATATTGAAACAGTTAAAGATGGTCCATACCACAAGGTAGTGATAAAGGAAGTGCCAACTACAGCCGGAAATAAGATAAAGGTATTCAACTGCATGTCCTGCAACGTTTACGTGACGACACTCTCAGAGTTCAAAGACCACCCCTGTAAAATTTTGAAGTACCCGTGCTCTCAGTGTCCAGTCGCATATGAAAACTCAAAGTCACTTTGTGCACATATGAAGGttcataaaataagaaacacagAAATCAATACGACGCCAACGAAACACGAGTGTGAGACATGTAACACAATATTTCCGTCTAGCAAGTCGTTGAAATTACATAAAAGGATGCATGACCCTATTAAAGCGCGTCAATTAGCACCTCAAGAAACTGAGGATGGTGTGATAGAAAATGAAGACAAATTCCTTTGTAATGTATGTAACAAAATGATACCTGAAAATTATAAGACGATACATCAAAACTCTCATAAGAGCAGCAACAAAATGAATTGTGACATATGCAATAAGAAGTTCCTATCAAAAGAAAATTTAGAGATGCACATGGGGGTACATAATTTAGATaagATAACAGTCGGTAAACAAGATAAGTCATTACCATATGAATGCATATATTGTAATAGAAAATTTGGAAGACCTCATGAAAAAGTCAAACATGAAAGAATACATACAGGCGAGAAACCTCACTCGTGCGACATTTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACACACACAGGCGCGCGACCGTACGCCTGTCCGCACTGCAACAAAAGGTTTAAAGCACACAGCGTATACAACCACCACCTCCTGACGCACTCGGACGTGCGTGCGTACAAGTGTCCGTTCTGCCCCAAGGCCTTCAAGACGTCGGTGCAGCTGGCGGGCCACAAGAACTCGCACACCAAGCCCTTCTCCTGCCAACAATGTAATAGGCCGTTCGCGTCCCTGTACGCGGTGAGGGTGCACATGGAGATCCACAATCGTCAGAACAGCCTGAAGTTCTCGTGCTCCCTGTGCGGCGCCAGCTACGCGCGGGCCTTCGCCCTCAAGGACCACGTGCGGCAAGTGCACAAGGACGCCACGaCGACTGTAAAGGATGAAGAATGGTTGCCTCAGGAGAACTCGACTGTGGAATCAGAAGACATGCAGCTTAACAAGGATTTTCCACAAGATATAAACGAGCTGGGCAGTTACGAGACGGAACTGATTATACCATAG
Protein Sequence: MGDFAFYCPLCCNATFDSKKSLIAHLTPISLNLVCPVCGIKFSSIERLVEHIKVDNCDVQSVNLEIKDHGISEETNTVISSESEKSKIESEEVKFVKIDGENRYVIVTDEDSALNPGITIVTKQNNDGTISLTTQDATSTNPKMLTDESDINNENLKSEVQNSQEERYSCNTCEMTFTSVLEHIQNYHNDQDVVVEEPIDENSSQEITMDFGQNGGGDMLEKQLSRRMITETGDIVETPISEDIETVKDGPYHKVVIKEVPTTAGNKIKVFNCMSCNVYVTTLSEFKDHPCKILKYPCSQCPVAYENSKSLCAHMKVHKIRNTEINTTPTKHECETCNTIFPSSKSLKLHKRMHDPIKARQLAPQETEDGVIENEDKFLCNVCNKMIPENYKTIHQNSHKSSNKMNCDICNKKFLSKENLEMHMGVHNLDKITVGKQDKSLPYECIYCNRKFGRPHEKVKHERIHTGEKPHSCDICGKSFRVSYCLTLHMRTHTGARPYACPHCNKRFKAHSVYNHHLLTHSDVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQQCNRPFASLYAVRVHMEIHNRQNSLKFSCSLCGASYARAFALKDHVRQVHKDATTTVKDEEWLPQENSTVESEDMQLNKDFPQDINELGSYETELIIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034852;
90% Identity: iTF_01034852;
80% Identity: -